| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_22220 |
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| Symbol | |
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| ID | 7313770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 2422006 |
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| End bp | 2423430 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643612674 |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_002509962 |
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| Protein GI | 220933054 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
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| TIGRFAM ID | [TIGR03007] polysaccharide chain length determinant protein, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAATA TACCCCATAA TTATGAGTAT GAGATTGATC TCACTGAATA CCTCGGAATT
TTAAATAAAA GAAAATGGCT GATACTGGCT ATAACTATCC TGGCAGGTGT TATGGGTTAT
ATCCTTACCT CATACAAACC GGCGGTATTT CAGTCAGATG CCCTGTTAAT GATAGATGAA
ACTCCTACTA CTTTAAATCA AATTGAACTA TCCCCTTTTA ACAACAATAA CAGGGATCTT
ATCACTTACA GTAAATTGTT AAAAACTAGG AAACTCCTTA AAAAAGTCAG TCAACACTTT
GACGAAAATA AGGTTTCAGT TAAGTATTTA ATTACTAACT TAAACATTGA GATTATACCT
GATACCAGGT TAATTAAAAT TTCCATAAAA CATACAGACC CGGTAATAGC CCGGCAGATT
ATATCATATC TAATAGAAGA ATTTATTATA AATAATAGGA ATTTAAAAAA ATCAGCAACG
GTTAATGCCC GAAACTATGT AGCCCGGCAA CTGGAGAAGG TCTCCAGGGA TTTAAAAAAT
ATTGAGGCAG AAGTCAGACA TTATAAAGAA GAAAACAAAA GCCTTGTTCT CTCTAATTTT
ACCCAGAAAA TTATGCAATC AATGCTGGAC CTGGAAGAAA ATCTGGCAGA AGTGGAAATC
AATATAAAAA CACATCGGGC TGCCCTGAAC CACTTATATA ACAAATTACA GTCGTCCCGG
GAGCTTATAT TATCATCTAA AACCCTTTCC AAAAACCCTG CTTATACAGA ACTTAAAAAT
AGACTGACAG AACTGGAAAT CGAGCTAGAC TCTTTGACAA CAGTCTATAC GGACAAACAC
CCTGAGATTA TTAAATTAAA AGCTGAGAAA AAATCAATCC TTAACGAAAT TTCTAATACT
CTTGGTGAAG TTATAACCTC AACCATCTAT ACGACAAACC CTGTTTATAA TAATCTAAAA
CAGGAATTAG TCAAACTGGA AACAGAGTTA ACCTCCCTGA AAGCGCAAAA AGAGTCTCTG
AATATCCAGT TTCAAAAGAT TAAAGCAAAA ACAGAGCAGT TACCCAAAAA AGAACTGGAG
TACTCAAGGT TACTCAGGAA ACTGGAGGTT TCTGAAAAAC TATATACCAT GCTTTTGACC
AGATACCAGG AATTAAAGAT AACTGAGGCC ATGAAGGTCT CTGATATTAT TACAGTCGAT
CCCCCGGTCG TGCCCGAAAG CCCGGTCGGA CCCAATATGA AATTAAACCT TGCCATTGCC
ATTATAATGG GTCTCTTTGT TGGTGTCTTT ATAGCTTTTA TTCTTGAATT TATAAATAAT
ACTATTCAGC GGGTTGAAGA AATTGAGGAA ATAACAGATG TACCAATAAT AGGTTATATT
CCTTATATAG ACAAAAAAAA TGATGGACGT GATCATAATA ATTAA
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| Protein sequence | MDNIPHNYEY EIDLTEYLGI LNKRKWLILA ITILAGVMGY ILTSYKPAVF QSDALLMIDE
TPTTLNQIEL SPFNNNNRDL ITYSKLLKTR KLLKKVSQHF DENKVSVKYL ITNLNIEIIP
DTRLIKISIK HTDPVIARQI ISYLIEEFII NNRNLKKSAT VNARNYVARQ LEKVSRDLKN
IEAEVRHYKE ENKSLVLSNF TQKIMQSMLD LEENLAEVEI NIKTHRAALN HLYNKLQSSR
ELILSSKTLS KNPAYTELKN RLTELEIELD SLTTVYTDKH PEIIKLKAEK KSILNEISNT
LGEVITSTIY TTNPVYNNLK QELVKLETEL TSLKAQKESL NIQFQKIKAK TEQLPKKELE
YSRLLRKLEV SEKLYTMLLT RYQELKITEA MKVSDIITVD PPVVPESPVG PNMKLNLAIA
IIMGLFVGVF IAFILEFINN TIQRVEEIEE ITDVPIIGYI PYIDKKNDGR DHNN
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