Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_22040 |
Symbol | |
ID | 7313752 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 2399595 |
End bp | 2401148 |
Gene Length | 1554 bp |
Protein Length | 517 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643612656 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_002509944 |
Protein GI | 220933036 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | [TIGR02900] stage V sporulation protein B |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAC AATCACTGTT AAAAGGGGCT TTTATCTTAA TAATTGCGGG TTTTATAAAC AGGGTGCTGG GTTTCATACT AAGGATAATA CTCGTCCAGA TGATCGGTGA TGAAGGACTG GGCCTTTTTC AGATGGTTTA TCCCTTTTTT ATAACCCTCC TTCTTATCAG TACCGCCAGT TTTCCCACGG CAATATCAAA ACTTATACCG GAAAGGCTGG CCCGAAATGA TAAAAAAGGA GTCTATCAAT TACTCAAGAC TTCATTACTT TTTGTTGGAG GGATGGGGCT ACTTACCGGC ACTCTTTTAT ACTTTTTATC TGGTTTTGTA TCACAGAACA TATTCGGTGA TCCCAGAACC AGGATTATTT TAATGACGTT AACCCCGGCC CTTTTTATAA CCCCTCTGGC CTCAAGCCTC AGGGGGTTTT TTCAGGGACA CCATACTATG ATTCCTACTG CTGTATCACA GATTACAGAA CAAATTAACA GGATGGGCTC CACCCTGGTT ATGGTCAGTA TAACCGGCTA TCTCGGTCTT AAATATCAGG CAGCCAGTAT TGGGCTGGGA ATCAGTATCG GGGAACTATC CGGGTTAATT ATCCTCCTAT ACTTTTTTGT TACACATATC AAGACCGATA ATAAAAAGAT AACCCCCCTG AGAATCAAAA CCGGGGTCTT CCACTGCTTT AAAGAAATTA CTAAAATTGC CTTTCCAATC ACAGCAGGGC GTCTAATCAA CTCTCTGATG TTAAGTGTGG AAGCTATTCT AATTCCCAGA CAACTTCAAA ACAGTGGTCT GGGGGTCAGA GAAGCCACCT CCCTGTTCGG TCAATTGAGT GGTATGGTAG AACAGATTAT CTTCTTTCCC ACAGTGGTAA CCATCGGTCT TACTACCAGC CTTATTCCAA ATATATCAGA TGCCCATGCC CGGAATAATA TAACTAAAAT AAGGAAAAAC TATCAGGATG TTATCAGGGT AACAACGTAT CTTGGTTTTC CACTGACGGT AATCTTTTTT CTAAGGGGAC GGGAAATATG TAATCTTTTA TTCAACTTCC CTGCTGCTGG CCCTATTCTA TCAGCTATGG CTCTGACCGC CACCTTTATC TATTATCTTC ATGTCTCTTC AGGAATGCTC AATGGCCTCG GAAAACCTCA ACTGGCCTTA TTAAATCTGG GAATCGGCTC TGCCATAAAA CTTACTGGAA TTTACTTTTT AACCCCCAGA CCAGAGCTTA GAATAATTGG CTCTATAATA AGTATAACTC TGGGTTATAT TGCAGCTGCC ATCCTTAATT TCTTTACCAT AGGAAATACA ATTGGTTATG ACCTTGATAT TAAACAGACC CTGGTAAAAC CACTATTTTC CAGTTTTCTT ATCTTCATAA TAACTCCGTA CCTGTCCCGT ATTTTACATC CCCTTTATAA CCTTTATAAT ATCCGGTTGG TTACACTATT AGAACTTGTA ATACTCGGCT TTGTTTACCT GATAACCATG TTTGCCATAA AAGCTATCAC GGCAGATGAT ATCAAGAGGT TTACCGGTAA CTAG
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Protein sequence | MEKQSLLKGA FILIIAGFIN RVLGFILRII LVQMIGDEGL GLFQMVYPFF ITLLLISTAS FPTAISKLIP ERLARNDKKG VYQLLKTSLL FVGGMGLLTG TLLYFLSGFV SQNIFGDPRT RIILMTLTPA LFITPLASSL RGFFQGHHTM IPTAVSQITE QINRMGSTLV MVSITGYLGL KYQAASIGLG ISIGELSGLI ILLYFFVTHI KTDNKKITPL RIKTGVFHCF KEITKIAFPI TAGRLINSLM LSVEAILIPR QLQNSGLGVR EATSLFGQLS GMVEQIIFFP TVVTIGLTTS LIPNISDAHA RNNITKIRKN YQDVIRVTTY LGFPLTVIFF LRGREICNLL FNFPAAGPIL SAMALTATFI YYLHVSSGML NGLGKPQLAL LNLGIGSAIK LTGIYFLTPR PELRIIGSII SITLGYIAAA ILNFFTIGNT IGYDLDIKQT LVKPLFSSFL IFIITPYLSR ILHPLYNLYN IRLVTLLELV ILGFVYLITM FAIKAITADD IKRFTGN
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