Gene Hore_21530 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21530 
Symbol 
ID7313391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp2343636 
End bp2344697 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content39% 
IMG OID643612605 
Productmannose-6-phosphate isomerase, class I 
Protein accessionYP_002509893 
Protein GI220932985 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1482] Phosphomannose isomerase 
TIGRFAM ID[TIGR00218] mannose-6-phosphate isomerase, class I 


Plasmid Coverage information

Num covering plasmid clones72 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTGT ACCCCCTAAA ATTCAAACCA GTTTACAAAA GCAAAATCTG GGGAGGCCGG 
AAATTAAAAG ATGTTTTTAA CCGGGACCTC CCCGATCAAA ACATCGGTGA AAGCTGGGAA 
GTTGCTGCTC ATCCCAACGG AACAAGTATT GTGGCCAATG GGTCTTTAAA AGGCCAGTCT 
CTCCCTGACA TTATTAATAC CTATGGAGAC AAGATAACGG GAGAAAAACT GGTAGATATA 
TGTCAGGAAA GATTTCCCCT TTTGATTAAA TTACTGGATG CTGAAAAAAA ACTTTCAGTC 
CAGGTCCATC CAGACAATGA TTATGCCCAC CGTGTTGAAA ATGATTCCGG GAAAACAGAA 
ATGTGGTATA TAATTGATGC CAGACCAGGG GCCAGACTCG TTTATGGACT AAAGCCTGGA 
ACTACAAAAG AACAACTGGC TAAAGCTATA AAAAGAGGTG AAATAGAGAA ATATCTTAAC 
CGGGTACCAG TAAAAAAGGG AGATGTATTT TTTATGCCTT CAGGAACCAT TCATGCCATT 
GAAGAGGGTA TCCTTCTGGC TGAAATACAA CAAAATTCAG ATACAACTTA CCGTGTCTAT 
GACTGGGACC GGGTTGGACA GGATGGAAAC CCACGACCAT TGCATATTGA AAAAGCCCTT 
GATGTAATTA ATTTTAAAAC CGACTCGAGT CTGGTAAATT ATAAACCTCT TTCTGTCAAC 
ACCGACCAGT ACCGCAGGGA CTTTTTAGCT GCCTGTCCTT ATTTTGTAAC AGAATACATT 
GAGGTCAAGG ATGAAATAGA TTTTATTATA AACAAATTTA TAGTATTGAT GTGTTTAAAG 
GGTACTGGTG AAATCCACTA TAATAACCGG AAAACCAGAA TAGCTGCCGG TGAAACCCTT 
TTAATTCCGG CTGCTTTAGA AAAAATAAAG ATCAGAGGGA ATGTAAACTT TATCAAAACA 
TTCATACCTT CCAGTAAATC TAATGTTATT AATGAACTGG CCGAACTGGG GTTTGACGAA 
GATAAAATAA AAACAATCCC GGGATTAACC AGCTGGAAAT AA
 
Protein sequence
MELYPLKFKP VYKSKIWGGR KLKDVFNRDL PDQNIGESWE VAAHPNGTSI VANGSLKGQS 
LPDIINTYGD KITGEKLVDI CQERFPLLIK LLDAEKKLSV QVHPDNDYAH RVENDSGKTE 
MWYIIDARPG ARLVYGLKPG TTKEQLAKAI KRGEIEKYLN RVPVKKGDVF FMPSGTIHAI 
EEGILLAEIQ QNSDTTYRVY DWDRVGQDGN PRPLHIEKAL DVINFKTDSS LVNYKPLSVN 
TDQYRRDFLA ACPYFVTEYI EVKDEIDFII NKFIVLMCLK GTGEIHYNNR KTRIAAGETL 
LIPAALEKIK IRGNVNFIKT FIPSSKSNVI NELAELGFDE DKIKTIPGLT SWK