Gene Hore_21280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_21280 
Symbol 
ID7313366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2317231 
End bp2317788 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content41% 
IMG OID643612580 
Productpredicted membrane protein 
Protein accessionYP_002509868 
Protein GI220932960 
COG category[S] Function unknown 
COG ID[COG4720] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000114527 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGACA GAAGAATAGT TAAAGAGTTG AGGAATTTAG AACCGGGGAA TCTGTCAACC 
CGTACTTTAT CATATCTGGC TTTGTTTGTT GCCTTTACTG CTGTAGCCAC TTATTTACAT
GTTCCCGGAC CATCCCAGTC ATATTTTAAC CTTGGTGAAG TCGCTATATA TTTTATAGCC
CTTGTCTTTG GCCCCAGGGC TGCTGGCATT GCAGGTGCAG CCGGTTCTGC CCTGATGGAT
ATGATTTTAG GTTACTATAT ATGGGCTCCC TTTACCTTCA TTATTAAGGG AGTAGAAGGG
TATGTAGTGG GTCGGTTCGG TAGTACTGAT AGCTGGGTTA AGAGCATAGT GGCGGTATTA
ATAGGTGGTC ATATTATGAT TGCTGGTTAT GCTATAACCA AAGGTTTTTT AATAAGCTGG
GCTGCTATAA TACCTGAACT GGGAATTGAT TATGCCCAGA TGTTAATCGG GGCTGTTATT
GCTATCCCCT TTGCTCACAA TATAAATAAG TTTATAGGAA GTGACAGTGA TGAAAATCGG
AAAGATTCCA AAAAATAA
 
Protein sequence
MPDRRIVKEL RNLEPGNLST RTLSYLALFV AFTAVATYLH VPGPSQSYFN LGEVAIYFIA 
LVFGPRAAGI AGAAGSALMD MILGYYIWAP FTFIIKGVEG YVVGRFGSTD SWVKSIVAVL
IGGHIMIAGY AITKGFLISW AAIIPELGID YAQMLIGAVI AIPFAHNINK FIGSDSDENR
KDSKK