Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_21280 |
Symbol | |
ID | 7313366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2317231 |
End bp | 2317788 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 643612580 |
Product | predicted membrane protein |
Protein accession | YP_002509868 |
Protein GI | 220932960 |
COG category | [S] Function unknown |
COG ID | [COG4720] Predicted membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0000114527 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCTGACA GAAGAATAGT TAAAGAGTTG AGGAATTTAG AACCGGGGAA TCTGTCAACC CGTACTTTAT CATATCTGGC TTTGTTTGTT GCCTTTACTG CTGTAGCCAC TTATTTACAT GTTCCCGGAC CATCCCAGTC ATATTTTAAC CTTGGTGAAG TCGCTATATA TTTTATAGCC CTTGTCTTTG GCCCCAGGGC TGCTGGCATT GCAGGTGCAG CCGGTTCTGC CCTGATGGAT ATGATTTTAG GTTACTATAT ATGGGCTCCC TTTACCTTCA TTATTAAGGG AGTAGAAGGG TATGTAGTGG GTCGGTTCGG TAGTACTGAT AGCTGGGTTA AGAGCATAGT GGCGGTATTA ATAGGTGGTC ATATTATGAT TGCTGGTTAT GCTATAACCA AAGGTTTTTT AATAAGCTGG GCTGCTATAA TACCTGAACT GGGAATTGAT TATGCCCAGA TGTTAATCGG GGCTGTTATT GCTATCCCCT TTGCTCACAA TATAAATAAG TTTATAGGAA GTGACAGTGA TGAAAATCGG AAAGATTCCA AAAAATAA
|
Protein sequence | MPDRRIVKEL RNLEPGNLST RTLSYLALFV AFTAVATYLH VPGPSQSYFN LGEVAIYFIA LVFGPRAAGI AGAAGSALMD MILGYYIWAP FTFIIKGVEG YVVGRFGSTD SWVKSIVAVL IGGHIMIAGY AITKGFLISW AAIIPELGID YAQMLIGAVI AIPFAHNINK FIGSDSDENR KDSKK
|
| |