| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_21060 |
|---|
| Symbol | |
|---|
| ID | 7313340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2285245 |
|---|
| End bp | 2286513 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612554 |
|---|
| Product | seryl-tRNA synthetase |
|---|
| Protein accession | YP_002509846 |
|---|
| Protein GI | 220932938 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0172] Seryl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGATA TGAAGTTCAT CAGGGAAAAT CTTGAAACCG TGGCTGATAT GCTTAAAAGA
AGAGGGACTG AAGCCCCCCT CGATGAATTT AAGGAACTGG ATGAGAAAAG GAGGGAAATT
ATTCAGGAAG TAGAACAGTT AAAACACAAA CGGAATGTTG TTTCCAGTAA AATTGGGGAG
TTAAAAAGGG CCGGTGAAGA TGCCAGTGAT ATTATTGCAG AGATGAAAGA GGTTTCGGCC
ACTATTAAGA AATATGATGA GGAATTAAGA GGGATAGAAG AGAGATTACA GCAGGTTGTT
TTATCTATAC CAAATATGCC CCATGACAGC GTTCCTGTGG GAGAAGATGA AGATGATAAT
GTAGAGGTTC GGCGCTGGGG TGAACCCCGC AAGTTTGATT TTGAGTTTAA ACCCCACTGG
GACCTTGGAG AAGCACTGGA TATTCTCGAC TTTGAAAGGG GTAGCAAGGT ATCTGGAGCC
AGGTTTACCT TCCTTAAGGG AGCCGGTGCC CGTCTGGAAA GAAGCCTGAT TAGTTTTATG
ATTGACCACC ATACCCAAAA TGGTTATACG GAGATATTTC CACCTTTTAT GGTAAACAGT
GATAGCTGTA TCGGAACCGG ACAGTTACCA AAATTTGCCG GCGATATGTT TAAGGTTGAG
GGAACCGATT ATTACCTTAT TCCAACAGCA GAAGTGCCTG TAACCAATCT TTACCGGGAT
GAAATATTGA ATGCTGAAGA CCTTCCAGTA TATCATGTTG CTTACAGTGC CTGTTTCAGA
GCAGAAGCCG GAGCCCATGG ACGGGATACA AGGGGAATTA TCAGACAGCA TCAGTTTAAT
AAGGTAGAAC TGGTTAAATT TGTTCATCCT GATAAATCTT TTGAGGAATT AGAAAAGCTG
ACCCGTAATG CTGAGGAAAT ATTACAGATG CTAGAGCTTC CCTACCGGGT AGTTACTCTC
TGCACCGGTG ATTTAACCTT CTCCTCGGCC AAAACCTATG ATATTGAGGT CTGGATGCCG
GCCTATGATA CCTATCGGGA GATTTCTTCC TGCAGTAACT TTAAAGACTT TCAGGCCAGG
CGGGCTGGAA TCAGATTCAG GCCTGAGCCA GGGGCTAAAG CCGAGTATGT CCACACTCTG
AATGGTTCGG GGCTTGCTAT TGGCAGAACG GTGGCTGCCA TTATGGAAAA TTACCAGAAT
GAAGACGGGA GTATTACTGT ACCTGAAGTG TTAAGACCCT ATATGGGTAT GGATGTAATT
AAACCTTAA
|
|---|
| Protein sequence | MLDMKFIREN LETVADMLKR RGTEAPLDEF KELDEKRREI IQEVEQLKHK RNVVSSKIGE
LKRAGEDASD IIAEMKEVSA TIKKYDEELR GIEERLQQVV LSIPNMPHDS VPVGEDEDDN
VEVRRWGEPR KFDFEFKPHW DLGEALDILD FERGSKVSGA RFTFLKGAGA RLERSLISFM
IDHHTQNGYT EIFPPFMVNS DSCIGTGQLP KFAGDMFKVE GTDYYLIPTA EVPVTNLYRD
EILNAEDLPV YHVAYSACFR AEAGAHGRDT RGIIRQHQFN KVELVKFVHP DKSFEELEKL
TRNAEEILQM LELPYRVVTL CTGDLTFSSA KTYDIEVWMP AYDTYREISS CSNFKDFQAR
RAGIRFRPEP GAKAEYVHTL NGSGLAIGRT VAAIMENYQN EDGSITVPEV LRPYMGMDVI
KP
|
|---|
| |