Gene Hore_20700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_20700 
Symbol 
ID7314394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2239950 
End bp2241062 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content41% 
IMG OID643612514 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002509810 
Protein GI220932902 
COG category[R] General function prediction only 
COG ID[COG2768] Uncharacterized Fe-S center protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.921643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCCAGTC AAGTTTACTT TGCCAGTACA AGAGCTAGCG GTCATAATGA AAGTCTTGTT 
GAAAAACTGT ACAAACTCTT TTTTAAAGCC GGTTTTCATG AATTTATTGA AGAAGACGAT
CTTGTAGCCA TAAAACTTCA CTTCGGTGAA AAGGGAAATA CCGGATTTAT TCGCCCCCTC
TATATCAGAA GGATTGTTGA AGCCATCAAA TCAAGGAAAG GAAAACCCTT TTTAACAGAT
GCCAATACCC TTTATGTTGG AAGCAGGGCT AATTCGGTTG ACCACCTGAA TACAGCCATC
GCCAATGGTT TTAGTTATGC CACCATCCAG GCTCCATTGA TAATAGCCGA TGGACTAACA
GGAAAAAACT TCACAGAAAT ACCGGTAAAC CTTAAACACT TTGATAAAAT AAAAGTTGGT
TCAGAAGTTA TGCATGCCGA TGCTCTAATC ACTGTTTCCC ACTTCAAAGG CCATGAATTA
ACAGGTTTTG GAGGCACCTT TAAAAATATT GGTATGGGAC TGGGTAGTCG CAGTGGAAAA
CAGATGATGC ATTCCGATGT CCTGCCGGAA ATAGATGAAG AAAAGTGTGA AAAATGCCGG
AAATGTGTTA AATTCTGCCC TGAAAACGCA ATTACCATTA ATAAGGAGAC AAGTACCATT
GATCAGAATC TCTGTATCGG CTGTGGTGAA TGTGTTGTTA CCTGCCCCAC CGATGCCATC
AAGATTCAAT GGGAAAGTAC CAGTCAGGGA GTTCAGGAAC GTATTGTAGA ATTCTCCTAT
GGTATTATTA AGGAGAAAAA AGACAAGATA GGATATATAA ACTTTGTCAT GAATGTCACC
CCTGATTGTG ACTGTGCATC CTGGAGTGAT AAATATATTG TTGATGATAT CGGTATCCTG
GCCTCAAAAG ATCCCCTGGC TCTGGAACAG GCGTCTTTTG ACCTTGTCAA TAAACAGGAT
GGACGCCACA ACACTGCATT AAAGAAAAAT CACAAACCAG GGGAAAACAA ATTTAAAGGG
GTCCACCCCA GTACCGACGG TGGTGTCAGG ACCCTTGAAT ATGCAGCCGA ACTGGGGCTT
GGCTCCCGTG ACTACGAATT AATTGAAATA TAA
 
Protein sequence
MASQVYFAST RASGHNESLV EKLYKLFFKA GFHEFIEEDD LVAIKLHFGE KGNTGFIRPL 
YIRRIVEAIK SRKGKPFLTD ANTLYVGSRA NSVDHLNTAI ANGFSYATIQ APLIIADGLT
GKNFTEIPVN LKHFDKIKVG SEVMHADALI TVSHFKGHEL TGFGGTFKNI GMGLGSRSGK
QMMHSDVLPE IDEEKCEKCR KCVKFCPENA ITINKETSTI DQNLCIGCGE CVVTCPTDAI
KIQWESTSQG VQERIVEFSY GIIKEKKDKI GYINFVMNVT PDCDCASWSD KYIVDDIGIL
ASKDPLALEQ ASFDLVNKQD GRHNTALKKN HKPGENKFKG VHPSTDGGVR TLEYAAELGL
GSRDYELIEI