| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_20690 |
|---|
| Symbol | |
|---|
| ID | 7314393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2238347 |
|---|
| End bp | 2239498 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 643612513 |
|---|
| Product | ROK family protein |
|---|
| Protein accession | YP_002509809 |
|---|
| Protein GI | 220932901 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TAAACCAGCA GACAATTTTA GAATTAATAA ATAATAAAGG GCCTATTTCC
AGGGCTGAAA TAGCTGAGAT TACTGGATTA ACGCCGGCTA CTGTCTCCAA CATAGTAAAG
GATCTCCTTA AGATGGATCT GGTCAGAGAA ACCCGGCAGG GAGAATCCCG GGGAGGAAGA
AAACCCATCT TACTGGAGGT AAATCCAGAA GGAGCCTACG TAATCGGCCT TGAATGGGGA
ATAGGGGAAA TAAAGGCTGT TCTACTTAAT TTAAATAAGA AGGTAATTAA AACTATAAAA
AAACAGGTAG ATAGTTTTAA ACCTGAGTGG TTTTTAAAGA CTACAGTAAC AATATTTGAA
GAGGTTACTG GTTATGTAGA AAATCCAGAT AAGGTATTTG GTCTCGGGAT AGGGATTCAT
GGTTTAGTTG ATCCAGATGA AGGTGTTTCC CTGTATGCCC CCCATTTTGG CTGGGAGAAT
ATTAAAATAG GTAAATTATT AAAACAGGAA TTACAGATTC CTATTATGCT GGATAATGAT
GTCAGGATGA TGGCCCTGGC TGAAAAATGG GAAGGCAGGG ATAATTTTAT ATTTATTAAC
ACCGGGCCAG GGATAGGTTC AGCTATAGTT ATTAAAGGAG AACTCCTCTA TGGTAGAGAT
TTCGGAGCCG GGGAATTCGG CCATATGACT ATTGTTGAAG ATGGGGCCCT CTGTAGTTGT
GGTAATCGCG GTTGTATTGA AGCCCTGGTT TCTGTTAATA ACCTTGTCAG GGAATATAAT
GATTCACTAC CGGAACATAT ATCATTCCAT GATATAAAGC GGGAGTGGAA TCTTTTAATA
GATTTAGCCC GTGAAGAAAA ATCCAGGGCC TATTCTATAA TTGAAAAGGC GGGCGTGTAT
CTAGGTAAGG GAATAGGAAA TGTGGTTAAT CTTTTAAACC CGGAAGCGGT AGTAATCGGA
GGAGACTTTT TACTGGCCAG GGATTTGATT TTTCCGGTTA TTAAAGAACA GGTATTAGAG
ACTGCCCTTA AGGTTCCGTC AAGGGACCTT GAAATAACAG GGACTGCTTT TGGTGAGAAG
GTTGGTGCTA TCGGGGCCGG TACCAGAGTC CTGCAGGAAA TTTTTAAATT AAAAAAGGAG
GAAGATAAAT GA
|
|---|
| Protein sequence | MKKINQQTIL ELINNKGPIS RAEIAEITGL TPATVSNIVK DLLKMDLVRE TRQGESRGGR
KPILLEVNPE GAYVIGLEWG IGEIKAVLLN LNKKVIKTIK KQVDSFKPEW FLKTTVTIFE
EVTGYVENPD KVFGLGIGIH GLVDPDEGVS LYAPHFGWEN IKIGKLLKQE LQIPIMLDND
VRMMALAEKW EGRDNFIFIN TGPGIGSAIV IKGELLYGRD FGAGEFGHMT IVEDGALCSC
GNRGCIEALV SVNNLVREYN DSLPEHISFH DIKREWNLLI DLAREEKSRA YSIIEKAGVY
LGKGIGNVVN LLNPEAVVIG GDFLLARDLI FPVIKEQVLE TALKVPSRDL EITGTAFGEK
VGAIGAGTRV LQEIFKLKKE EDK
|
|---|
| |