Gene Hore_19990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19990 
Symbol 
ID7312814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp2155646 
End bp2156623 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content44% 
IMG OID643612445 
ProductABC-type uncharacterized transport system, periplasmic component 
Protein accessionYP_002509741 
Protein GI220932833 
COG category[R] General function prediction only 
COG ID[COG2984] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value9.09791e-17 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGAAGG TGAGTAGGAA AGTAGTTCTG GCAGGAATGG TCTTTTTTTT ATTGTTGTTT 
GCAGCAGGTT GTGAGAAGGA ATCAGAGGTA CTAAAAGTAG GTATTGTTCA GATTGTTGAA 
CACCCGGCTC TGGATGCAGC CCGTAAGGGC TTTATCGATG CCCTGGCTGA TAATGGGTAT 
AAGGAAGGAG AAAATATTGA ATACGATTAT CAGAATGCCC AGGGCGATAT GTCTCTGGCC 
AGGACGATTG CCGGAAAGTT TAAGCGGGAA AAACCTGATT TGATCCTGGC AATTGCTACT 
CCAACAGCCC AGGCTGTTGC CAATACGATA AAGGATATAC CGATATTTAT TACGGCAGTA 
ACCGACCCCG TAGCAGCTGG CCTGGTTAAG TCTATGGAGA AACCGGGAAC CAATGTGACC 
GGGACTACTG ATATGACACC GGTAGAAAAA CAGATTAATC TCCTCTTGAA GTTTAAACCT 
GATACCACTA AAATCGGAGT GGTTTATAAT GCCGGTGAGG TTAATTCAGT TGTCCAGGTG 
GATTTAGCCC GTAAAGTCTG CAAGGAGCTT GATATAGAAC TGGTAGAGGC AACTGCCAGT 
AATAGTAGTA GTGTATATCA GGCGGCCCAG TCTCTAATAA ACAGAGTAGA TGCCATTTAT 
GTTCCAACCG ATAATACAGT GGTTTCTGCC ATTGAATCGG TGGTTAAAGT TGCCGAAGAG 
AATGATATTC CACTTATTGT CGGGGAAGAG GACTCGGTCA AAAGGGGAGG TCTGGCTACT 
GTAGGTATTA ACTATTACGA GCTTGGATAT CAAACAGGGG AGATGGCCCT GGAGGTTATT 
AAGAATGATG CTAAACCGGA AGAGATGGCA ATACAGAAAC AGGATAAGGT CAGGCTGGTA 
ATAAATGAAA AGGCGGCTGA AGAAATGGGA GTTACCATTT CTTCTGAGCT TAAGAATGAG 
GCGGCAAAAA TCTATTAA
 
Protein sequence
MEKVSRKVVL AGMVFFLLLF AAGCEKESEV LKVGIVQIVE HPALDAARKG FIDALADNGY 
KEGENIEYDY QNAQGDMSLA RTIAGKFKRE KPDLILAIAT PTAQAVANTI KDIPIFITAV 
TDPVAAGLVK SMEKPGTNVT GTTDMTPVEK QINLLLKFKP DTTKIGVVYN AGEVNSVVQV 
DLARKVCKEL DIELVEATAS NSSSVYQAAQ SLINRVDAIY VPTDNTVVSA IESVVKVAEE 
NDIPLIVGEE DSVKRGGLAT VGINYYELGY QTGEMALEVI KNDAKPEEMA IQKQDKVRLV 
INEKAAEEMG VTISSELKNE AAKIY