Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_19780 |
Symbol | |
ID | 7312793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 2129803 |
End bp | 2130564 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643612424 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002509720 |
Protein GI | 220932812 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 71 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAGTG GTTCTTTTAA AACACCGATA GAAATACAGG CAATGGAACC CACCTGGATA CCCAGTACAT TCACCCTTGA TAACTACCGG GATATGAACA GAACAGTACC AATCCTGAAA TTTTTTAAGA ACAGTCTGAT TATCAGTCTT GGGACTATGA TTGTAACAGT TGTAATTGGC ACACTGGCAG CTTACTCAAT ATCAAGATTC AGATTCAGGG GTAGAAATGC ATATCAATTG TCACTGTTTT CAACACAGAT GTTACCAGGT ATTTTGTTTT TGATACCCTA TTTCGTCATG TTTACCTGGA TAAAAAACAC TCTGGGCATA CCGATGACCA ATACATACCA CGGGATGATA TTTACTTATA CTTCATTTTC ATTACCATTT TCCATTATTA TGCTAAGAAA CTATCTTGAT TCGGTACCCC GGGAGATTGA TGAACAGGCA ATGATAGATG GTTGTTCCAG AGTAAAGGCA CTATTTAAAG TGATACTCCC CCTTGCCAAA CCCGGGATTG CAGCAGTTGG TATTTACTCT TTTATTATGG CCTGGAATGA AATACTGTTT GCTATGGTCT TAACCAGAAC AGAGACCCGT ACTATTTCCA TAGGTTTGCT GCAATATATT ACTTCAAACC AGGCCCACTG GGGCCAGATG ATGGCAGCAT GTATTATGAC AACCATTCCT GTAATAGTAC TCTTTACATT AATGCAAAAA CATATTGTTC AGGGACTGGT ATCAGGTGCT ACAAAAGGAT AA
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Protein sequence | MISGSFKTPI EIQAMEPTWI PSTFTLDNYR DMNRTVPILK FFKNSLIISL GTMIVTVVIG TLAAYSISRF RFRGRNAYQL SLFSTQMLPG ILFLIPYFVM FTWIKNTLGI PMTNTYHGMI FTYTSFSLPF SIIMLRNYLD SVPREIDEQA MIDGCSRVKA LFKVILPLAK PGIAAVGIYS FIMAWNEILF AMVLTRTETR TISIGLLQYI TSNQAHWGQM MAACIMTTIP VIVLFTLMQK HIVQGLVSGA TKG
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