Gene Hore_19730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_19730 
Symbol 
ID7312788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2119912 
End bp2120670 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content44% 
IMG OID643612419 
ProductABC transporter related 
Protein accessionYP_002509715 
Protein GI220932807 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG4555] ABC-type Na+ transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones59 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGTC TGATTGAGGT TAATAATCTA ACCAAGGTTT TTAAGGAAAA GGACAGGGTT 
ATCACTGCTT TAAAAAATGT TTCTTTCAGG GTCAAATCCG GGGAAATTTT CGGACTTCTG
GGTCCCAATG GAGCCGGAAA GACCACCACC CTCAGGATTA TATCAACCCT GATGGTGCCT
ACCGAAGGAG AGGTTACGGT AAAAGGATAT AATACCGTTA CTGATAGTCA GAAAGTGAGG
TCAAGTCTTG GTTTTCTTAC AGCTGAAATG AACCTTTATG ACTACTTCAC GGTCAGGGAG
CTTTTAGAAT TTTTTGCCCG GGTCAATGGT ATGCCCGGAA CGGAAACTGA AAAAAGGATT
CCGCAAATCC TCAAACAGCT CGGTCTTGAA GAATATGCCG ACCGGCGGGT TGATAATTTC
TCGACAGGGA TGAAACAAAA GGTATCTATA GCTAGGGCTT TATTGCCCGA TCCCCCGATT
TTAATCTTTG ATGAGCCGAT AAACGGTCTG GATATTATGG CTGCCCGGGT TGTAACCCGC
CTGATAGAAC AGCTGAGGGA TAGGGGCAAA TCTATCATAG TATCTACCCA TAATATGACC
CTGGCGGAAA GCATCTGTGA CCGTCTGGGG ATACTGTTTG ATGGAGAACT AATTGCTACC
GGAAGTCATA AGGATCTGTC CGGGCAGACA GGGGAAGAAA GACTTGAAGA CATATTCTTT
AAACTGGTAG GTGAAGACTA TGAACTGGAC CAGAATTAG
 
Protein sequence
MDSLIEVNNL TKVFKEKDRV ITALKNVSFR VKSGEIFGLL GPNGAGKTTT LRIISTLMVP 
TEGEVTVKGY NTVTDSQKVR SSLGFLTAEM NLYDYFTVRE LLEFFARVNG MPGTETEKRI
PQILKQLGLE EYADRRVDNF STGMKQKVSI ARALLPDPPI LIFDEPINGL DIMAARVVTR
LIEQLRDRGK SIIVSTHNMT LAESICDRLG ILFDGELIAT GSHKDLSGQT GEERLEDIFF
KLVGEDYELD QN