| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_19590 |
|---|
| Symbol | |
|---|
| ID | 7312774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 2103918 |
|---|
| End bp | 2106377 |
|---|
| Gene Length | 2460 bp |
|---|
| Protein Length | 819 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 643612405 |
|---|
| Product | homocysteine S-methyltransferase |
|---|
| Protein accession | YP_002509701 |
|---|
| Protein GI | 220932793 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
|---|
| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.399567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCTAATG ATTTTACCAG TACATTACAG GAAAAAATAA TAATTGGGGA TGGAGCTATG
GGTACCATGC TTCAGGCCTG TGGACTTTCA TCCGGGCATG CCCCTGAAAG CTGGGTTATA
AAAAAGCCGG ATACCATATA TAAAATCCAT AAGGAATATG TAGCAGCAGG TGCAGGGTTA
ATAGAAACCA ATACCTTTGG GGCCAACAGG CTGAAACTTA AATCATTGGG GTTAGAAGAT
AAGATAGAAG AGATTAATGT AAAAGCCACA GGATTGGCCC GCAAAGCAGC GGGAAAGGTT
TTTGTGGCAG GCTCGGTTGG CCCTACTGGA AAATTAATGG AGCCCCATGG CGATCTTTCC
TTCGACAGGG CCAGGGACGT TTTTAAAGAA CAGATATCAT ACCTGGTTCA CGCCGGGGTA
GATGTGGTTA TTATCGAGAC CATGAGTGAT CTTAAAGAAC TCCGGGCAGC GGTGGTAGCA
GCTAAAGAAT TTAATGTACC GGTTATTGCC CAGATGACTT TTACAGAGAG GGGGATAACC
TTGACGGGTT CTCCCCCTGA GGTGGTTGCC ATTGTTCTTG ATAAAATGGG AGTAGATGTT
ATCGGTGTTA ACTGTGTGGC CGGGATTGAA GAAGCCCTTA TAGTTATAAA GAAAATGTCC
CGGGTTACTT CAAAACCCCT GAGTGTTTTC CCAAATGCAG GGCTCCCTGA AAGCAAAGGT
GGCGAAACAG TTTATCCTCA AACCCCTGAT GCCTTTACAG ATAAAATACC AGAACTTTTA
AAGTATAATG TAAAATTGAT TGGGGGGTGC TGTGGGACCA ATCCCCGGTT TATTAAAGGG
ATAAAACAGG TTGTTTATGA AGCTAAAGTA AGTAATAATA CAAATACTGA TGCAAAAGAT
GAGAATAAAA ACCGGACATA TTTAACTAGT AACCACACCT ATTTACAGGC AAGTGAGGAT
AAACCGGTTT TTCTCATCGG GGAAAGGATT AATCCCACCG GGAGAAATGA TTTAAAAGAG
GCTTTAAAAG GAGAAAAATG GTCTGTTTTA AGGAAAGAAG CCCGGGAACA GGTTATTGCC
GGGGCCCACT TACTCGATGT TAATATCGGG ATGGCCGGCA TTGACCGGGA AAAGTGTATG
AAAAAAGTTA TCCAGGAATT ACAGCTTGAG GTTGATGTTC CCCTGGTAAT CGATACACCG
AGGACCGGAG TCCTGGAAAC TGCTTTAAAG GAATATACCG GTCGGGCCTT GATCAACTCA
GTAAATGGTA ATCCTGACGT TATGGATAAA GTATTTCCCC TGGCCTGTAG ATATGGAGCA
GCTGTTATTG GATTGACCCT TGATGATAGG GGGATTCCTT CTGAGGTTGA GGGCAGGCTT
GAGATTGCTA GACAGATTAT AGCCAGGGCT AGAGAATATG GACTTGGTGA AGAAGATATT
ATTATTGACC CCATTGTCTT AACAGCCGGT TCTAACCAGT CAGAGGTTAT GAAGGGGATT
GAGACTTTAA AAAGGATCAA GGAGGAACTG GGGGTTAAAA CTACCATGGG TATCAGTAAT
GTTTCCCATG GGCTTCCGAA CCGAAAATTA ATTAATAGAA CCTTTCTGGC TATGGCCCTG
GGGGCAGGTC TTGACTTCCC CATTGTTGAT CCCGTGGATG AGGATTTAAT GGCCACAGTC
AGGGCAGCTA ATCTTTTAAC TGCCCGGGAT AGAAACGGAC AGAATTTTTT GAAGTGGTAT
GGGAATTTTC AGGGTAATAA ATCCCTGGAA GAGGATCGGT TGGATAATAA TAAAGAGACT
AAATCATCCA GGGATAAGGA AAATGACCGT CTCCTGTCAT CGATTGCGGA TATAGTGGTT
AGCGGAGATA CTGACATTAT AGAAGAACAG GTTGCCCGGG CCCTGGAGCT ATATCAACCC
CGGGAAATAA TTAATAGGGC CATGGTAAAG GGGCTTAAAA GGGTTGGTGA CCTATATGAC
AGGGGAGAGT ATTTTTTGCC CCAGTTGATG CAGAGCTCCC GGGTTGTTAA AAAGGCCTTT
GACCTTTTAA AGGAGAGGAT GAACTCAAAA GGAAGAGAAA TAAATAAAGC CGGCCGGATT
CTGCTGGCTA CTGTAGAAGG TGATATTCAC GATATTGGCA AAAATATAGT TAAGGTAGTC
TTTAATAACT ATGGCTTTGA GGTTGTAGAT CTCGGGGTAA ATGTTAAAAG TGATGATATT
GTAGAAGCAG CCTTTGACCA TAAAGTTGAT ATCGTGGGAT TAAGTGCCTT AATGACCGTA
ACCATGGAGA AGATGAGGGA GACCGTCAAT ATCCTGAAAC AGAAAGGGTT TAAGGGAGGA
ATAATCATTG GTGGTGCAGT TACCAGTGAG GATTTTGCCC GGGAGATAGG GGCTGACCTC
TATGCCGGTG ATGCCCTCGA TGGGGTAAGG AAAGTAAAAA AATATCTAAA TTTAAATTAA
|
|---|
| Protein sequence | MANDFTSTLQ EKIIIGDGAM GTMLQACGLS SGHAPESWVI KKPDTIYKIH KEYVAAGAGL
IETNTFGANR LKLKSLGLED KIEEINVKAT GLARKAAGKV FVAGSVGPTG KLMEPHGDLS
FDRARDVFKE QISYLVHAGV DVVIIETMSD LKELRAAVVA AKEFNVPVIA QMTFTERGIT
LTGSPPEVVA IVLDKMGVDV IGVNCVAGIE EALIVIKKMS RVTSKPLSVF PNAGLPESKG
GETVYPQTPD AFTDKIPELL KYNVKLIGGC CGTNPRFIKG IKQVVYEAKV SNNTNTDAKD
ENKNRTYLTS NHTYLQASED KPVFLIGERI NPTGRNDLKE ALKGEKWSVL RKEAREQVIA
GAHLLDVNIG MAGIDREKCM KKVIQELQLE VDVPLVIDTP RTGVLETALK EYTGRALINS
VNGNPDVMDK VFPLACRYGA AVIGLTLDDR GIPSEVEGRL EIARQIIARA REYGLGEEDI
IIDPIVLTAG SNQSEVMKGI ETLKRIKEEL GVKTTMGISN VSHGLPNRKL INRTFLAMAL
GAGLDFPIVD PVDEDLMATV RAANLLTARD RNGQNFLKWY GNFQGNKSLE EDRLDNNKET
KSSRDKENDR LLSSIADIVV SGDTDIIEEQ VARALELYQP REIINRAMVK GLKRVGDLYD
RGEYFLPQLM QSSRVVKKAF DLLKERMNSK GREINKAGRI LLATVEGDIH DIGKNIVKVV
FNNYGFEVVD LGVNVKSDDI VEAAFDHKVD IVGLSALMTV TMEKMRETVN ILKQKGFKGG
IIIGGAVTSE DFAREIGADL YAGDALDGVR KVKKYLNLN
|
|---|
| |