Gene Hore_18990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_18990 
Symbol 
ID7312714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp2028712 
End bp2029668 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content40% 
IMG OID643612346 
Productperiplasmic binding protein 
Protein accessionYP_002509642 
Protein GI220932734 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGA AAAGTATTAT TAAAAAAGTG GTTGTAGTTG TTATGGTGGT GATTTTTGCA 
GGTTTTTCAG GAGTATTTGC AGCAGGGGAA GATAGAGCTG ACGGTTTTAC GGTTACAGTT
GTAGATGATC TTAATAGAGA AATTCGTCTT GAAAAAAAGC CAGAGAGGAT TATTTCCCTG
TCTCCCAACA TTACTGAAAT TCTATTTGCC CTGGGACTTG ATGAAGAAAT AGTAGGGGTG
ACAACTTATG CTGATTACCC TGAAGCAGCC CTGGAAAAGG AAAAGATAGG AACCATAGTT
GAGCCCAATA TTGAAAAGAT TATTTCTTTA AAACCTGACC TGGTCTTTGC AGCCGGGATT
AATAAACTGG AAACGGTCTT TACCCTTAAA AAACTGGGAA TTAAAGTTGC AGGGTTTAAT
CCGACCAGGG TTAATGATAT TTTTGTTACC ATTAAAAAGA TTGGAAAACT GACGGGAAAG
AGTAAAGAGG CCCGGGCGAT GGTAACTTCG ATGTATATTG AGATGGCAGA GATTCAGGAA
CTGGTTGATG CTGCTCTAAA AGATAGACCC CGACCCCGGG TTTTTTATGA AATCTGGAGT
GATCCCCTTT ACACGGCAGG AAAAAATACC TTTATTGATG ATGTCATAAA TCTGGCAGGT
GGGGTTAATA TTGGAGCCAA AGCCCCGGGT AAGTGGCCCC AGTTTAACCT GGAACAGTTA
TTAATTGAAA ACCCTGATGT CTATATTTCA AGCCTTCACA GTGCTCCAGG TAAGGTTACG
GTTGAAAAGA TTAAGAAAAG GACGGGATAT AGTTCGTTGA AGGCTGTAAA GAATAACCGT
GTTTATATTG TTGACCAGAA TTTAGTAAGC CGGCCCTCAC CACGGATAAT AAAGGGGTTA
AAGGAATTTG TAAAGGCTCT CTTTCCTGAA CTGAGGGATA AAATTAATGA TATGTAA
 
Protein sequence
MTKKSIIKKV VVVVMVVIFA GFSGVFAAGE DRADGFTVTV VDDLNREIRL EKKPERIISL 
SPNITEILFA LGLDEEIVGV TTYADYPEAA LEKEKIGTIV EPNIEKIISL KPDLVFAAGI
NKLETVFTLK KLGIKVAGFN PTRVNDIFVT IKKIGKLTGK SKEARAMVTS MYIEMAEIQE
LVDAALKDRP RPRVFYEIWS DPLYTAGKNT FIDDVINLAG GVNIGAKAPG KWPQFNLEQL
LIENPDVYIS SLHSAPGKVT VEKIKKRTGY SSLKAVKNNR VYIVDQNLVS RPSPRIIKGL
KEFVKALFPE LRDKINDM