| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18530 |
|---|
| Symbol | |
|---|
| ID | 7313851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1978270 |
|---|
| End bp | 1978782 |
|---|
| Gene Length | 513 bp |
|---|
| Protein Length | 170 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 643612300 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002509597 |
|---|
| Protein GI | 220932689 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3773] Cell wall hydrolyses involved in spore germination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.711957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTACT TAAGAGAAGA GATAAAGAAG GATCTGGGGA TAGAAGAAAA GCCTCCTGCA
TATAGTGATG AAGAATTAGA ATTAGTAACA AGAACAGTAT ATGCAGAAGC TTTAGGTACA
ACTAATTTAG AAAGAAAAGC AGTAACTTGG GTAATTAGAA ATAGGGTGGA ATCAAGTTAT
TATCCGGATA ACTACGAAGA AGTAATAAGA GAAGAAAATG CGTTTGAAAG TGTTACTGAA
AAAAGTCCAC TCTGGAGAGA AAGTAAAGCT CCTGACAAGA GAAATGAACC AGAATATCAA
GAAATAAACA AAATTGTCAA AGAAATAATG GATACATCAT CTGATGATGA TATTACTCAT
AGGGCTTTGT TGTTTCATGA TACGAACACT CAACCTGAAA CGCCTAGCGG ATGGAATAAA
GATGTTATTA ATGAAGTTAC TGATAAAATA TATCCAGAAT CTATTATTGC TGATGATGCA
AATCAGTTTA GATTTTATCA AGAATTTAGA TAA
|
|---|
| Protein sequence | MNYLREEIKK DLGIEEKPPA YSDEELELVT RTVYAEALGT TNLERKAVTW VIRNRVESSY
YPDNYEEVIR EENAFESVTE KSPLWRESKA PDKRNEPEYQ EINKIVKEIM DTSSDDDITH
RALLFHDTNT QPETPSGWNK DVINEVTDKI YPESIIADDA NQFRFYQEFR
|
|---|
| |