| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_18230 |
|---|
| Symbol | |
|---|
| ID | 7313821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1946127 |
|---|
| End bp | 1947287 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643612270 |
|---|
| Product | transcriptional regulator, LacI family |
|---|
| Protein accession | YP_002509567 |
|---|
| Protein GI | 220932659 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTACAA TAAAAGATAT TGCAGAACGG GCCGGAGTCT CTACCGCTAC TGTATCCCGG
GTTTTAAATA ACAGTCCCCG GGTTAAAGAG GAGACCAGGG TCCGGATTCT TGAGATTATT
AAGGAGACCG GTTATGGGCG GTACCGGAAG GGTATTAAAA AGAGCCCTGA TAGTAAGGTG
ACTATCAGGG AGGTAGCAAG GGAGGCCGGG GTATCAGTGG CCACTGTTTC CCGGGTCATA
AATGGAGACA GTGCTGTGAG TCCTCAAACC CGGAACAGGG TAAAAAAGGC CATGCAGGCC
CTGAACTATC ACCCCAATTT ACTGGGACGC CAGCTGAGGA GAAGGGAAAC AAAAAGTATT
GGAATTATTA TCCCCGAGAT ATCAAACTTT TTCTTTGCCC GGGTCATCAA AGGGATTGAA
AATGTGGCTG AATGTGAAAA CTATAACGTA ATTTTGATGG AGAGTAACAG AAAGGACCAT
ATCGCGGCCA TAAAGGCCCT GTATGAGCGG CGGATTGATG GTTTAATCTA TATGACCGGC
CACCTGACAA AACAGGAGAT TGATTTTTTC AGAGAGCTCA AATTACCGGT TGTACTCCTT
TCCCAGGACT TTTGTGCTCC TGATATACCT TCAGTAAATA TTAATAATAG GGAAGCAGCG
TTTGAAGCTG TGACCTACCT TCTAAAAAAG GGGTATAAAA GGATTGCTTT TCTGGGTGGT
CCTTTTTCTG ACAGGGTATC TGTTTTCAAC CGGTTTAAAG GATACTGTGG GGCTTTAAAA
GAGTATGGCC TAAAACCCGA TAAGCACTTG ATAAAAGAAG GTGAGTTTAG CCTGGAAAGC
GGTTATGATA TGTGCTACCG GCTCCTTCAG GAAGGTCCAG AAGTTGAGGC AATATTTGCT
GCCAATGATG AAATTGCCAT TGGTGTTATC AAGGCCCTTA CCGTGAAAGG ATATAAAATA
CCCCGGGATA TTGCTGTGAT TGGCTTTGAT GACCTCCCTG TGGCCAGGTT TACAGTTCCT
TCTCTCACCA CGGTCCATCA ACCTATTTAT AAAATGGGCC GGGAAGGAAT GAATCTCCTC
TTGAAACTTA TCAAAAATAT TCCTTTAAAG GAATCCCATG TGACCTTGAA TCATAAACTT
ATTATCAGGG ATTCGGCCTG A
|
|---|
| Protein sequence | MVTIKDIAER AGVSTATVSR VLNNSPRVKE ETRVRILEII KETGYGRYRK GIKKSPDSKV
TIREVAREAG VSVATVSRVI NGDSAVSPQT RNRVKKAMQA LNYHPNLLGR QLRRRETKSI
GIIIPEISNF FFARVIKGIE NVAECENYNV ILMESNRKDH IAAIKALYER RIDGLIYMTG
HLTKQEIDFF RELKLPVVLL SQDFCAPDIP SVNINNREAA FEAVTYLLKK GYKRIAFLGG
PFSDRVSVFN RFKGYCGALK EYGLKPDKHL IKEGEFSLES GYDMCYRLLQ EGPEVEAIFA
ANDEIAIGVI KALTVKGYKI PRDIAVIGFD DLPVARFTVP SLTTVHQPIY KMGREGMNLL
LKLIKNIPLK ESHVTLNHKL IIRDSA
|
|---|
| |