Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_18180 |
Symbol | |
ID | 7313816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1939920 |
End bp | 1941668 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 643612265 |
Product | putative Chase2 sensor protein |
Protein accession | YP_002509562 |
Protein GI | 220932654 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4252] Predicted transmembrane sensor domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000000385352 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGGGTA AGAAAAACTT CAGGTTCAAA ATCAACATAT TTAATATAGC TATTATTATG ATTATAATTT TTTTATATTT TCTTAATGTT TTCTTACCCC TGGATAACAA ATTATTTGAT ATTTTACTGG TGGGACGGTA TTTATTTAAG CCCCCTGAAG TGGATAATAT CGTTCTTGTG GTCATAGATG ACAGGTCTTT ATCAGAACTC GGTAGCTGGC CCATTAGTCG TTCTTATTAT GCCCGGGCTA TCAGGATGCT GGAAAAAGAG CGGGCCAGGG CTATTGGCCT GGATATTATC CTGGAGGCTT CCTCTGGGCG GGAAGCGGAT GAAAAACTGG TTAAGGTCTT AAGCCAGTAT GAGAATGTGG TTTTACCGGC AGTTGCCAGG GTAGGCCTTG TCAGGGGTTT AAAGACCCAG CATTTAACTG TAAATAAAAT TAGTAAACCG TGGCCTCCTT TCAGGGAACG GTCAATCCAG GGTCACATTA ACTTTATACC TGACCGTGAT GGGATAATAA GGCGATTGAG GCCGGTTATG GATAAAGATG GAGAGAAGAT ATTTGCCTTC AGTGCGGAAC TGGCCCGTTT TTACAGCGAT AACATATATA AGGAGCTTGA GGAACAGGCG GGGGGAATAT TAATTAATTT TCCAGGACCC CCTGGAACCC TTCCACAGGT ATCTTTTATT GACCTTATAG AAGGTAATTA CAGGCCCGGT TTTTTTAAGG ATAAACTGGT TATTATCGGT ACCCGGCTTA CAGGACTGGG TGACCGGTAC ATGACCTCCT TTGCCCGGTA TGGTTATGTA ACCGGGGTTG AGATTCACGG CCAGGTATTG TATAGTCTTA TTAACAACTC CTATATAACT GACTCACCTT TTATTGTCAA TATAATTTTA ATGCTGTTAA CCGGACTAAT ATTATCCTTT ATATTTTTGA ATAACCCGCC GTCTCGGTCG GGGTTAATAC TTTTTCTGGT TCTAGTACTA CTGTCAGTTC TCGGTTTTAT TCTCTTTTTC CGTTACCGGT ATTACCTTCA CCTGTCAGGG CTTTATATAA CTGCCTTTAT GATGTATGTT ACAGCCCTGG GGATGTGGTA TTTCTCCAGT GAAAGGGAAA GACAGAAGCT GGCCAGGACT TTTTCCCGGT ATATATCACC TGAGGTCATG AAAGAACTTT TAAATAACCC GGGTCTGGTA AACCCTGGTG GCCAGAGGAT GGAAGTTACA GTCCTCTTTG TTGATATCAG GAAATTTTCA GATTATGCCC GAAAAAGGGA GCCTGAAGAG GTTGTTAAGG ACCTCAACAG GGCTTTTTCC AGAATAAACC GTGTTATATT TAAATACCGT GGTACTCTGG ATAAATATCT CGGGGACGGC CTGCTTGCCA TTTTTGGGGC ACCGGTTCCC GGGGATCATC ACCGGGAAAG GGCCCTTATG GCCGCTATTG AAATTCTTGG AGAAGATATT TCCTTTGAGC TGGGGGTTGG TCTTAATACC GGTCAGGTTG TGGTCGGTAA TATCGGTTCG GACATAAGGA TGGATTATAC GGTGGTGGGC CATGTGGTTA ACCGGGCAGC CCGATTTGTT GAAATTGCCC GTCCCGGGGA GATAGTTATT GGTAATAATA CTTATTCAGG TCTTCCGGAC AGGTTAAAAA ATATGGACTG GCAACGAGAT GAATATAAAG ATAGTAATAT AGGGTCAGCT GAAAGGGTTT ACCGCCTGAT GAGGAGGGAA CAGGTATGA
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Protein sequence | MKGKKNFRFK INIFNIAIIM IIIFLYFLNV FLPLDNKLFD ILLVGRYLFK PPEVDNIVLV VIDDRSLSEL GSWPISRSYY ARAIRMLEKE RARAIGLDII LEASSGREAD EKLVKVLSQY ENVVLPAVAR VGLVRGLKTQ HLTVNKISKP WPPFRERSIQ GHINFIPDRD GIIRRLRPVM DKDGEKIFAF SAELARFYSD NIYKELEEQA GGILINFPGP PGTLPQVSFI DLIEGNYRPG FFKDKLVIIG TRLTGLGDRY MTSFARYGYV TGVEIHGQVL YSLINNSYIT DSPFIVNIIL MLLTGLILSF IFLNNPPSRS GLILFLVLVL LSVLGFILFF RYRYYLHLSG LYITAFMMYV TALGMWYFSS ERERQKLART FSRYISPEVM KELLNNPGLV NPGGQRMEVT VLFVDIRKFS DYARKREPEE VVKDLNRAFS RINRVIFKYR GTLDKYLGDG LLAIFGAPVP GDHHRERALM AAIEILGEDI SFELGVGLNT GQVVVGNIGS DIRMDYTVVG HVVNRAARFV EIARPGEIVI GNNTYSGLPD RLKNMDWQRD EYKDSNIGSA ERVYRLMRRE QV
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