Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_16980 |
Symbol | |
ID | 7313216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1816782 |
End bp | 1818245 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643612145 |
Product | nucleoside-diphosphate sugar epimerase |
Protein accession | YP_002509442 |
Protein GI | 220932534 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATT TATTAATTAT AGGAGCTGGA AGTGCCGGTA AGCTTGTTCT TGAGGAAATT TTAAAAAATA ACGAGAGCTA TAATTATAAT ATAATTGGTT TTTTAGACGC TGATATTAAT AAGCATGGGA CAAGCATTCA TGGCTATAAA GTTTTAGGTC ATCATGATAA TATTTCCTTT TATATTGATC AATACAGTGT TGATGAAGTT ATAGTAGCCA CTACAGAAAT TGACCGTGCT GGATTAGAAA AAATATACCA AAACACAAAG AAATTTCAAA TTGGGATAAA AGTTTTACCA ACCCTTCAAG AGTTACTTAT GGAAGAACCT TTCACTAAAC AATTGAGAGA AGTAAGGGTA GAAGATTTAT TAGGTAGAGA GCCTGTAAAA ATTAATAGTG ATAACATCTA TAAATATATC AATCATAAAA AGGTGTTGGT TACTGGGGCT GCTGGATCAA TAGGAAGTGA ACTTTGTCGC CAGATTGCTA AATATGATCC CCGGGAGTTA ATAATATTAG ACATAAATGA AAATGAACTC TATTTTTTAA ATCTATTTTT AAAAAGACAT TATAATTTAA ATGTCAGTTT AGAAATATGT AATATAAGGG AAAAAAGCAA ATTAGAATAT TTATTTAACT ATTACAAACC TCAGCTTGTA TTCCATGCTG CAGCCCACAA ACATGTACCA TTAATGGAAA AAAATATAGA TGAAGCTATA AAAAATAATG TTTTTGGTAC TAAAAACCTG CTGGATCTTT CTGACAAATA TGGAGTGGAA AAGTTCGTTT TAATATCAAC TGATAAAGCC GTTAATCCTA CCAATGTTAT GGGGGCTACT AAACGTTTAT CAGAAATTAT GTTGGAGAAG ATCAATAAAT ATTCTAAAAC CCAGTACATG GCAGTAAGAT TTGGAAATGT CTTAGGAAGT AATGGCAGTG TGGTACCTTT ATTTAAAACT TTAATTAAAG AGGGTAAAGA TTTAACAGTT ACCCATGAAG AGGCAACCCG TTACTTTATG ACCATACCGG AAGCTGTCCA ACTTGTCCTT GAAGCTGGTT TTATAGGTAA AGGGGGAGAA GTTTTTGTTC TGGATATGGG TGAACCTGTT AAAATAATAG ATTTAGCTAA AAAGATGATT GAGTTGTCAG GTTTAACCCT GGGTAGGGAT ATTAATATAA AAATTACTGG TTTAAGGCCT GGTGAAAAAT TACATGAAGA ACTTATGCAT GATATTAACT CTTGTGAAAA GACACAGAAT AAAAAAATAT ATATTGCAAA GATAAGAGAA GAAAATGTAG ATATAGAAAA AGGTTTACAG GATTTAAAAC GATATTTGAT GTCTTTTGAC AGAAAAAAAC TGGTAAAAAA GCTTAAAGAA TTGGTACCTA CTTATAAAGA CAATAGTTAT AGTGAGGAGA ATATAGATGG AAGACAAACT AAATATTCCG TTATCAGTAC CTAA
|
Protein sequence | MKNLLIIGAG SAGKLVLEEI LKNNESYNYN IIGFLDADIN KHGTSIHGYK VLGHHDNISF YIDQYSVDEV IVATTEIDRA GLEKIYQNTK KFQIGIKVLP TLQELLMEEP FTKQLREVRV EDLLGREPVK INSDNIYKYI NHKKVLVTGA AGSIGSELCR QIAKYDPREL IILDINENEL YFLNLFLKRH YNLNVSLEIC NIREKSKLEY LFNYYKPQLV FHAAAHKHVP LMEKNIDEAI KNNVFGTKNL LDLSDKYGVE KFVLISTDKA VNPTNVMGAT KRLSEIMLEK INKYSKTQYM AVRFGNVLGS NGSVVPLFKT LIKEGKDLTV THEEATRYFM TIPEAVQLVL EAGFIGKGGE VFVLDMGEPV KIIDLAKKMI ELSGLTLGRD INIKITGLRP GEKLHEELMH DINSCEKTQN KKIYIAKIRE ENVDIEKGLQ DLKRYLMSFD RKKLVKKLKE LVPTYKDNSY SEENIDGRQT KYSVIST
|
| |