| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_16620 |
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| Symbol | |
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| ID | 7313180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1785278 |
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| End bp | 1787113 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643612110 |
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| Product | predicted polymerase, contains PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| Protein accession | YP_002509407 |
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| Protein GI | 220932499 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATAGAGG TAGTTCGTGT TACTGCTCCC GATGAGAAAA AGGCCCTGGA AATAGGTAAA
AAGGAATTGG AGGCAAAAAC AGGACAGGTT GTAGCTGTAG ATAAACTCAA GGTTACGTTA
GTAAGGGAAA AGAAGGGTTT TCTTGGACTT AAAAGCAGGA AAAATGTCTA TGAAGTCACT
TACGAAGAAG AAGAGTCTAT TGAACAAAAA GAAGAACTAC TGGATATGGT CATGGAGAAT
CTGGGAATTG ATGGGGACTT TAGAATCAGG GTCAGTGATA ACGGAATATT TCTTAGGATC
ATCCCACCTG AGGGAGAAGG TGATCCTGTT CACTACCATG ATATAAAGAC TGCCCTTGAT
AAAAAGGAAA TAGTCGAAGT AGACTGGCAG TCGATACAGG AGGCATTGAA TAAACAATCA
GAAGAATGGG TTAAGATTGC CCCGCGTTAT CCCGAGCTTG ACCGGGATGC AGAGGCCGAG
GTGGAGATAA GCCGTGATAA ACTGAAGGCC TTTATGTCCT ATAAACCTCC CCTCGGTGGA
AAAGACCTGA CCATAGATGA TCTTCATGAT ATCTTAAAGG AATCAGGGGT AGTTTATGGT
ATCAAAGAAG ATAAGCTGAT AGAAATACTG GAGGAAGATG AACCGATTGA TAAAGTTCTG
GTGGCAGAAG GTGAAGAACC TACCCCGGGA ATTGATGCTG AACTGGTCTA CCACTTTGAG
ACCAGGGAAG AGTCAGTTGG TACCCAGCGG GAAGATGGTA GTATAGATTT TTATAACCTT
GGATTAATTA CCAATGTTAA ACCCGGTGAA GTTCTGGTCA CCAAAATTGA CCCCCAGCCG
GGAGAGCCGG GTAAAACGGT TACCGGGGAA GAACTTCCCC CACCGAAACC GCGGGATAGA
GAGTTGCCAG GGGGAAAAAA TGTAGAAAGA AAAGATGACA ATACCCTGGT TGCTACTGTA
TCGGGGCAGG TTGTAAAACG GGGTAATAAA GTCAGTGTTT TACCGGTTTA TGAGGTTAAA
GGTGATGTTG ACTTAAGTGT AGGTAATATA GATTTTGTTG GTAATGTATA TGTCAGGGAT
AATGTTCTGG AAGGCTTTGA AATCAGAGCT GATGGTAATG TTGAGGTCAG GGGGCATGTC
TCAGCAGCCA ATATTGAATG TGGCGGGGAG TTAATAATCC ATAAAGGTTT TGTTGGAAAA
AATAAGAGCC GTATTAAGGC CGATGGTAAT GTCAGGGTAA AGTTTGTTGA AAATGGAACC
ATTGAGGCTG GAAAAAATAT AATTATCAGT GATGCGGCCA TGCATAGCCG GTTGACAGCA
GGGCGTAAAA TAGAAATAAA GGAGAAAAAG GGATTACTGG TCGGTGGAAT TTGTAAAGCT
GGAAAAGAGC TTGAAGCCAA TATCATAGGT TCAGTACTGG CTACCGATAC CCGCCTTGAG
GTTGGGGTCG ACCCCATGAT GAAGGAAAGA TTAAAAAAGA TTAAAAAGGA AATAGAAGAA
GCAGAGATGA ATATTACAAA AACAAAAAAA GCCTTAAATA TCATGGAACA GCTTAAAAAA
CAGAGAGGCC AGCTTCCCCA GCAGAAGGAG ATTATGTATG ATCGCCTGAC GAAAACAGTA
AAAAAACTGG AAAGTATGAT TGAATCTAAA GAGAGGATCT ATAAACAGCT TGAAGAGAAG
ATTGCAAATA AAACCCGGGG TCGCCTTGTT GTCAATCAGA AGATTTACCC AGGTGTTAAG
ATTGCCATCG GTAACTCCCA GTATAATGTC CATGATGAAA TGAACAGGAC CTGTTTCATT
GAAGATGAAG GGGAGATAAG GCAGGTCCCT GTATAG
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| Protein sequence | MIEVVRVTAP DEKKALEIGK KELEAKTGQV VAVDKLKVTL VREKKGFLGL KSRKNVYEVT
YEEEESIEQK EELLDMVMEN LGIDGDFRIR VSDNGIFLRI IPPEGEGDPV HYHDIKTALD
KKEIVEVDWQ SIQEALNKQS EEWVKIAPRY PELDRDAEAE VEISRDKLKA FMSYKPPLGG
KDLTIDDLHD ILKESGVVYG IKEDKLIEIL EEDEPIDKVL VAEGEEPTPG IDAELVYHFE
TREESVGTQR EDGSIDFYNL GLITNVKPGE VLVTKIDPQP GEPGKTVTGE ELPPPKPRDR
ELPGGKNVER KDDNTLVATV SGQVVKRGNK VSVLPVYEVK GDVDLSVGNI DFVGNVYVRD
NVLEGFEIRA DGNVEVRGHV SAANIECGGE LIIHKGFVGK NKSRIKADGN VRVKFVENGT
IEAGKNIIIS DAAMHSRLTA GRKIEIKEKK GLLVGGICKA GKELEANIIG SVLATDTRLE
VGVDPMMKER LKKIKKEIEE AEMNITKTKK ALNIMEQLKK QRGQLPQQKE IMYDRLTKTV
KKLESMIESK ERIYKQLEEK IANKTRGRLV VNQKIYPGVK IAIGNSQYNV HDEMNRTCFI
EDEGEIRQVP V
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