Gene Hore_16430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16430 
Symbol 
ID7313160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1765368 
End bp1766363 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content44% 
IMG OID643612090 
Productpeptide chain release factor 2 
Protein accessionYP_002509387 
Protein GI220932479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000953459 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGACC CCGGGTTATG GGATGATAAT AAGAAGGCCC GGGAAATTAC CAGAAAATCC 
AAGGTGGTTA AAGACAGGAT TAAATCCCTG AAAAAACTGG ATGAGCTCAG GGAAGAAGCA
GAGGTTATGA TTGAACTGGC CGAAGAGGAT GAAACCAACA GGGAGCTCTG GAGTGAAGTT
GAGGATTATA TTAACTCCCT GGAAGAAAAG ATCGATAAGA TGGAATTGAA ATTCAGACTG
AATGGGGAAT ATGATGATTG TAATGCTATA TTGTCCATTC ACCCCGGAGC CGGTGGGACT
GAATCCCAGG ACTGGGCAGA TATGTTATTG CGGATGTATG TTCGCTGGGC AGAAAGCCAT
GGCTATAAGG TAGAAACCCT TGATTACCTG CCCGGTGATG AAGCCGGTAT TAAGAGGGTA
ACCCTTCTGA TTTCCGGTGA ATATAGTTAT GGTTATCTAA AAGGTGAAAA GGGTGTTCAC
CGACTGGTAA GGATTTCTCC CTTTGATTCT TCAGGGAGAA GGCATACATC CTTTGCTTCA
GTTAATGTTA TTCCTGAAAT TGATGATGAT ATTGAGGTTG ATATAGATAC CGGTGATTTG
AAAATAGAGA CATACCGGGC CAGTGGGGCC GGTGGCCAGC ATGTCAATAA GACAGATTCA
GCTGTAAGGA TTACCCATAT ACCGACCGGT ATTGTAGTCC AGTGTCAGAA TGAACGTTCC
CAGCATAAAA ACAAGAAAAT GGCCATGATG ATTTTAAAGG CCCGGCTACT GGAATTAAAG
AAAGAGGCCC GGGCTGAGAA AATAGAAGAG CTGAGGGGAG AAAATAAAGA GATTGCCTGG
GGTAACCAGA TCCGGTCTTA TGTTTTCCAC CCCTACAATC TCATAAAGGA TCACAGGACC
GGTCTGGAGG AAGGTAATGT CCAGAAGGTG ATGGATGGTT ATATTGATGA GTTTATTGAG
GCCTATCTGA AGACGGGTAA TAAAGGCAGG GAATAA
 
Protein sequence
MSDPGLWDDN KKAREITRKS KVVKDRIKSL KKLDELREEA EVMIELAEED ETNRELWSEV 
EDYINSLEEK IDKMELKFRL NGEYDDCNAI LSIHPGAGGT ESQDWADMLL RMYVRWAESH
GYKVETLDYL PGDEAGIKRV TLLISGEYSY GYLKGEKGVH RLVRISPFDS SGRRHTSFAS
VNVIPEIDDD IEVDIDTGDL KIETYRASGA GGQHVNKTDS AVRITHIPTG IVVQCQNERS
QHKNKKMAMM ILKARLLELK KEARAEKIEE LRGENKEIAW GNQIRSYVFH PYNLIKDHRT
GLEEGNVQKV MDGYIDEFIE AYLKTGNKGR E