Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_16340 |
Symbol | |
ID | 7312670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1756338 |
End bp | 1756994 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643612081 |
Product | L-serine ammonia-lyase, beta subunit |
Protein accession | YP_002509378 |
Protein GI | 220932470 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00719] L-serine dehydratase, iron-sulfur-dependent, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000000000000548669 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTGTAT TTGATATAAT GGGTCCTGTA ATGATTGGCC CTTCAAGTTC CCATACTGCA GGTGCTGCCA AAATAGGCCG CCTGGCCAGG CTTCTTTTCA GGGATAAAAT AGAGCAGGCC AGGATTTATT TCCACGGTTC CTTTGCTGAG ACCTACCACG GCCATGGTAC CGATAAAGCA GTGGTCGGGG GGTTGCTGGG TTATAAAGTG GATGATACCA GGATAAAAAA ATCCCTCGAG ATAGCCCGAC AGAATGGTAT TGATGTTAAA TTTTATTCAA TAAAAATGAA AGATGTTCAT CCCAATACAG TTTTAATAAA ATTGAAAAAA GGGGATAAAG AATTGGAGGT AACTGGTTCA TCCATCGGTG GGGGAAATAT AGTGGTTCAT AATATAGATG GTTATGAAGT TAATATCAGG GGTAATTATC CAACCCTCTG GGTCCTTCAC CGGGATAAAC CCGGGGAAGT GGGGATTATT ACTTCAATTC TCGGTTGCTA TAAATTAAAT ATTGCTTTTA TGAGGGTTTT CAGGAAGAAA AGAGGGACGA TAGGTTCCAG TATTATTGAG CTTGACCAGG ATGTGGATGA GGATATTATT GATCATTTAC AGGGGATGAA AGATATCTTA AAAGTAAGGT ATATACCCCC TTTATAA
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Protein sequence | MGVFDIMGPV MIGPSSSHTA GAAKIGRLAR LLFRDKIEQA RIYFHGSFAE TYHGHGTDKA VVGGLLGYKV DDTRIKKSLE IARQNGIDVK FYSIKMKDVH PNTVLIKLKK GDKELEVTGS SIGGGNIVVH NIDGYEVNIR GNYPTLWVLH RDKPGEVGII TSILGCYKLN IAFMRVFRKK RGTIGSSIIE LDQDVDEDII DHLQGMKDIL KVRYIPPL
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