Gene Hore_16330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16330 
Symbol 
ID7312669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1755447 
End bp1756313 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content48% 
IMG OID643612080 
ProductL-serine ammonia-lyase, alpha subunit 
Protein accessionYP_002509377 
Protein GI220932469 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1760] L-serine deaminase 
TIGRFAM ID[TIGR00718] L-serine dehydratase, iron-sulfur-dependent, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.59813e-17 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTATT CTACTATCAA AGACTTAATA GACCTGGCTT TTGATCTTGA TACCACCATT 
TCGGAGGTTG TCATCAGGAC GGAAATGGAG GATTCAGAGA GATCAAAGAT ATCTATTGAA
AAACAGATGA TGCATAACCT TGAGGTTATG AAAAACTCCA TCAATGAAGG ACGAAAAGGT
ATTATTAGAT CAACGAGTGG AGTTATTGGC GGTGAATCTC ACCGGTTAGT GGGGTACAGT
GGCCCCCTGA GCGGGGGGTT ATATCATGAA GTTATTATTA ATGCCCTGGC AGTTTCGGAA
GTTAATGCCG GTATGGGCAA GATTGTGGCC TGCCCCACCG CCGGTTCCAG TGGTGTTATT
CCTGCGGTAG TGATATCGGT CGGCCAGGAA TATGACCTTT CTGATAAAAA AATATGTAAA
AGCCTCTTTA CTGCAGCAGG TCTGGGGGAA ATAGTTGCTA AAAAAGCTAC CCTGGCCGGT
GCAGCCGGTG GCTGTCAGGC CGAGTGTGGT GTGGCAGCAG CCATGGCAGC CGGGGCTGTT
GTCGAACTAC TGGGTGGAAA TCCGGAAATG GTCGGCCATG GGTTTGCTCT GGCCCTGAAA
AACTTACTGG GCCTTGCCTG TGATCCTGTG GCTGGACTGG TTGAAGTTCC CTGTGTTAAA
AGAAATGGTT TTGCCGCTAC CCATGCCCTT ACTGCGGCCA GTATGGCCCT GGCCGGTATT
GAAAGTGTTA TCCCTCCTGA TGAAGTAATT GAAGCCATGA TTGATATCGG TAATCTTTTA
CCCCAGTTCC TTAAGGAAAC ATCACAGGCC GGGCTGGCTA CAACCCCGAC CGGGCTCAGA
ATTAAAAAAA GAATTGACAG GAAGTAG
 
Protein sequence
MEYSTIKDLI DLAFDLDTTI SEVVIRTEME DSERSKISIE KQMMHNLEVM KNSINEGRKG 
IIRSTSGVIG GESHRLVGYS GPLSGGLYHE VIINALAVSE VNAGMGKIVA CPTAGSSGVI
PAVVISVGQE YDLSDKKICK SLFTAAGLGE IVAKKATLAG AAGGCQAECG VAAAMAAGAV
VELLGGNPEM VGHGFALALK NLLGLACDPV AGLVEVPCVK RNGFAATHAL TAASMALAGI
ESVIPPDEVI EAMIDIGNLL PQFLKETSQA GLATTPTGLR IKKRIDRK