Gene Hore_16240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_16240 
Symbol 
ID7312660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1745873 
End bp1746640 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content39% 
IMG OID643612071 
ProducttRNA methyltransferase complex GCD14 subunit 
Protein accessionYP_002509368 
Protein GI220932460 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2519] tRNA(1-methyladenosine) methyltransferase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGGTG GTTTAACCAA TAAAAGGGTT ATAACTGACC GGAAAAGGTT TAAAAAGGTT 
ATCAGTATAG AACCGCCCCA TAAGATAGGT TTACCAACGG GTCAGATAGA TAGTAAGGTA
CTTAAGGATA TAAGACCAGG AAGTTATTTT GAAATAAATG GTTCCCGTTA TTATGTCCTG
GAGTGTGACC TTCATAACTT TATCATGAAT GATTTAAAAA GGAGAACCCA GATTGTTTAC
CCCAAGGATG CTTCCTATAT TATTTTTAAA CTGGATATAG CTCCCGGGAA ACGTATCGGT
GAAGCCGGTA CAGGTTCGGG AGCTTTAACC AGTGTTTTTT CCAGGATGGT AGGACGGGAT
GGCCGGGTAT ATACATATGA AAAAAGAAAG GATTTTATAA AAGTTATAAA GAGGAATCTG
GCTCAGGTTC AGGAATTTGA TAATGTTGTT CTTCACAACC AGTCTCTGGA AGATGGAATC
GAGGAAAAGG GGCTTGATGC CTTCTTCTTA GATGTAAGGG AGCCATGGCA GGTTCTTAAA
AAGGTCAAAT TATCCCTGAA AGGTAATGGT CATCTGGGGT TAATACTTCC CACTACAAAT
CAGGTCAGTA AAACTCTTGA AGTTTTAGAG AAATTAAATT TTTATGTATC TGAGGTGGTA
GAGGTTTTAT ACCGGGAATA CAAGCTCATA CCGGAGAGGC TACGACCCGA CGATACGATG
GTTGGCCATA CAGGTTATTT AATATTTGCC CGTAACTTAA TTGATTAA
 
Protein sequence
MAGGLTNKRV ITDRKRFKKV ISIEPPHKIG LPTGQIDSKV LKDIRPGSYF EINGSRYYVL 
ECDLHNFIMN DLKRRTQIVY PKDASYIIFK LDIAPGKRIG EAGTGSGALT SVFSRMVGRD
GRVYTYEKRK DFIKVIKRNL AQVQEFDNVV LHNQSLEDGI EEKGLDAFFL DVREPWQVLK
KVKLSLKGNG HLGLILPTTN QVSKTLEVLE KLNFYVSEVV EVLYREYKLI PERLRPDDTM
VGHTGYLIFA RNLID