Gene Hore_15980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15980 
Symbol 
ID7312634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1711814 
End bp1714276 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content41% 
IMG OID643612045 
Productphosphoglucomutase 
Protein accessionYP_002509342 
Protein GI220932434 
COG category[G] Carbohydrate transport and metabolism
[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1109] Phosphomannomutase
[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGGTG TAATTATGGC CGGCGGGCAG GGTTCGAGGT TACGTCCGCT AACATGTAAC 
CTACCCAAGC CCATGGTTCC TGTGATGAAT TATCCGGTTA TGGAATATAT CATAACCCTT
TTAAAAAATT ATGGCATAAA AGATATTGCT GTCACAACTT ATTATCTTCC GAACAAAATT
GAGAGTTATT TTGGTGATGG TAGTAAATGG GGGGTAAACC TCCATTATTT TGTTGAAAAA
GAACCCCTGG GGACAGCCGG AAGTGTTGCT AATGCCAGGG ATTTTTTAGA TGAACCTTTT
ATGGTTATAA GTGGTGACGC CATTACAGAT TTTGACCTGG GAGAAGCAAT TTCCTTTCAT
CAGGAAAAGG GGGCTTCAGC TACTATAGTT CTGGCCAGGG TTAAAACCCC ACTGGATTAT
GGGGTGGTTA TTACCGATGA AAGGGGTAGA ATAGTCAGAT TTTTGGAAAA ACCAAACTGG
GGGCAGGTTT TCAGTGACAC CGTCAATACC GGAATATATG TCCTGGAGCC CGAAATTTTT
GATCTCTATG ATAAGGGTAT TAACTTTGAT TTCAGTAAAG ACCTGTTTCC TTTAATGCTT
GAAAAAAACT GGAACTTATA TGGAATTTCA CTTAAAGGTT ACTGGAATGA TATTGGGAGT
CTTGAAGAGT ATATCAACAC CAATTTTGAT TTCTTTAAAG GAGAAATTGA TTTACCGCTT
GAAGCCTGTT GTGTCCTGGA TAACAATATC TGGCTTCAGG ATGGGGTTGA AATAGATGAA
ACGGCTGAAC TGGAAGGTCC ACTCTTTATT GGGGAAGGGA CCAGGATTGG TAAAGGGGCC
CGGGTAGCAA ATTCAATAAT AGGACGTAAC AATTATATTC AACCCCATGC TTCCATTAAG
AAAAGCATTC TCTGGGATAA TAATTTTGTT GGTGCCAATG CTGAAATCAG GGGAGCAGTA
ATTACAGAAA ACGTGGTAGT CAGGGAACGG GGTAGTATTT TTGACCTGGC TGCCGTCGGG
GAAAAGGTAG TAATCGGTGA AGAGAGCAAG GTTGCTCCCG GTATTAAAAT CTGGCCTGAA
AGGGAAATTG AGTCCAGAGT AGAGGTTAGA GACAATATCG TCTGGAGGCC CCGGTGGCAG
AAAAAACTAT TTACCAATAC CGGGGTTATA GGGGAAGGGA ATATCGATAT TACCCCTGAA
TTTGTAACCA GACTGGCGGT AGCATTTGCC TCGACTATAG ATAGAAATAA AAGTATAACG
GTAAGTTCAG ATACATATGG ACTGACCAGT GCATTAAAAA GGGCGGTTAT TTCCGGGATT
CAACTGGCAG GGCGAAATGT CCTGGAGCTC GGGGAGATTA CTACAGCTGT AGCCAGATAT
GGGATTATTA ATATGCAGGC AGGAGGCGGT ATTCATATCC GGTTAAGTTA TAATAATCCT
GAGAAAGTAG TTCTGGAGTT TATGAATGAA AAAGGGGTAA ATTTACCGGC TCCGGACCAG
AAAAGGGTTG AAAAAAAGTT CTTTACAGAG GATTATAACA GAGCTCCTGT AAATGACATA
GGTGATTATG CCCTGGTTCC AGAAATGGTA AATGAATATT TATATGGCAT TCTCGATACA
GTTGATACTG AAGCCATTAA ACGTAACTAT TTCAGTGTGG TGATTGACTA TGAATATGAT
AGTTTAAACC ATCTCTTACC CCTGTTATTA AAAAGACTAA ATTGTCAAAT GTTATCTACC
AGAAATTATT CCCGGACCGG TCGACCTTTA AGCCTTCAAG AAAGGCTGGA AGCAAGAGAT
AAGGTTAGCA GGATATTGAA TGAGAATGAG GCAGATCTGG GGATTATTGT TGACCATAAT
GCTGAAAGAT TAAATCTTGT TGCCGGAAAT AAACAGGTAC TGGACCCCTT CAAATACCAG
GTAATGCTTT CTTACCTGTT GTTAGAAAGG GGAGTCAAAA AATTATTTGT TCCCTTTAAT
TCTCCCAAGG TAATTGAAAA TATAGCCGAT GATTATGATG CCGATGTTGT TTATACTCCT
CTGGCCCCCC AGGTTTCCAT GGAAAAGTAT ATGGTTTATG AACACAACCC ATTTAAGTTT
TATCCCTTTA ATGATGCCAT AGCTGCTCTG GTATTAATCC TGGAAAAAAT GGCAGTGGAG
AATATATCTT TTGAGCAATT ACTCAACCGC CTTCCCGAGT TTTACCTGGA AAGGGTTGAA
ATACCCTGTG AATGGCACGA CAAGGGTCGG GTTATGAGGA GGCTGGCTGA AGAAGCCAGG
GACAATACTG AACTGGTTGA TGGTATTAAG TTTAACCATA GAAACGGCTG GGCCCTGGTT
ATACCCGATA ATGAGGAACC AGTCTTTCAT ATCTTTGCCG AAGGTCAGGA TGAAGAAACA
GCCGAGAGTT TAACCGGTTT TTATATAGAA AAGGTAAAAA GGTTAATAGA TAAGGATAAT
TAA
 
Protein sequence
MKGVIMAGGQ GSRLRPLTCN LPKPMVPVMN YPVMEYIITL LKNYGIKDIA VTTYYLPNKI 
ESYFGDGSKW GVNLHYFVEK EPLGTAGSVA NARDFLDEPF MVISGDAITD FDLGEAISFH
QEKGASATIV LARVKTPLDY GVVITDERGR IVRFLEKPNW GQVFSDTVNT GIYVLEPEIF
DLYDKGINFD FSKDLFPLML EKNWNLYGIS LKGYWNDIGS LEEYINTNFD FFKGEIDLPL
EACCVLDNNI WLQDGVEIDE TAELEGPLFI GEGTRIGKGA RVANSIIGRN NYIQPHASIK
KSILWDNNFV GANAEIRGAV ITENVVVRER GSIFDLAAVG EKVVIGEESK VAPGIKIWPE
REIESRVEVR DNIVWRPRWQ KKLFTNTGVI GEGNIDITPE FVTRLAVAFA STIDRNKSIT
VSSDTYGLTS ALKRAVISGI QLAGRNVLEL GEITTAVARY GIINMQAGGG IHIRLSYNNP
EKVVLEFMNE KGVNLPAPDQ KRVEKKFFTE DYNRAPVNDI GDYALVPEMV NEYLYGILDT
VDTEAIKRNY FSVVIDYEYD SLNHLLPLLL KRLNCQMLST RNYSRTGRPL SLQERLEARD
KVSRILNENE ADLGIIVDHN AERLNLVAGN KQVLDPFKYQ VMLSYLLLER GVKKLFVPFN
SPKVIENIAD DYDADVVYTP LAPQVSMEKY MVYEHNPFKF YPFNDAIAAL VLILEKMAVE
NISFEQLLNR LPEFYLERVE IPCEWHDKGR VMRRLAEEAR DNTELVDGIK FNHRNGWALV
IPDNEEPVFH IFAEGQDEET AESLTGFYIE KVKRLIDKDN