Gene Hore_15340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_15340 
Symbol 
ID7313127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1641168 
End bp1641887 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content39% 
IMG OID643611976 
ProductVitamin B12 dependent methionine synthase, activation domain protein 
Protein accessionYP_002509278 
Protein GI220932370 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1410] Methionine synthase I, cobalamin-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones57 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGACA GGGCTGATAA TATAAAAATA GCAGATAATA TAAAAGATGT GGTTGTTTTT 
CAGGATATAC CGGTTAACTT AGATTTAAAG GATATTATTA ATAAATGTCA CTTGAATAAT
GAAAATGATA TTGAAAGGGT AACAGAACTG GTGGATGAAG CTATAGAGGT TGCCAGGCCC
CGGGGGATTT TTAAGGAGTC CCATATACAG AAAAGGGGCC AGGATTACGT TATAATAAAT
GGAATTAAAT TTAACAGTCA TGTTATGTAT ATAAACCTGA AGGATATATA TAAAGTTTAC
CCCTATATAG TTACTGCTGG TTCTGAACTG GAAACGTGGG CCAGTAACTT TAATGATATT
CTGGAAAATT ACTGGGCTGA TATCATCCAG AAAGAGATAC TCGAAGGGGC CAGTAATTAT
ATATTTGCCA GGTTGAAGGA TATATATAAC CCTGGTTCGA TAGCTATTAT GAATCCGGGC
TCGCTGGACT GGCCCATAAG TGAACAGAAA AAACTCTTTA AATTACTGGG TAATTACGCT
GACAGGATAG GGGTCAGGCT CACCGATAGC TATCTAATGG TACCGACCAA ATCCTTATCT
GGCCTGGTGT TCCCGTCCAC TACTGATTTT AAAAACTGCA GATTGTGTTC CCGGGAACAA
TGTCCTGGCC GCCGGGCCCC TTATGATAAC AAACTCAGCA GGGAATACGG GATGAAATGA
 
Protein sequence
MTDRADNIKI ADNIKDVVVF QDIPVNLDLK DIINKCHLNN ENDIERVTEL VDEAIEVARP 
RGIFKESHIQ KRGQDYVIIN GIKFNSHVMY INLKDIYKVY PYIVTAGSEL ETWASNFNDI
LENYWADIIQ KEILEGASNY IFARLKDIYN PGSIAIMNPG SLDWPISEQK KLFKLLGNYA
DRIGVRLTDS YLMVPTKSLS GLVFPSTTDF KNCRLCSREQ CPGRRAPYDN KLSREYGMK