Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_15210 |
Symbol | |
ID | 7313114 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1625089 |
End bp | 1626066 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643611963 |
Product | CRISPR-associated protein Cas1 |
Protein accession | YP_002509265 |
Protein GI | 220932357 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGTTGG TTATCAACAC ATACGGTAGT TACCTTCATG TAAAACAAAA ATCGTTTGAA ATAAAGACTG AAGAGGATAA AAAGAGGGTT TCTGCTAAAA AGGTTAGTTC AATATTAATT ACCACAGGTG CTGCCATCAG TACAGATGCA GTTAAACTGG CCCTGGAAAA TAATATTGAA ATACAGTTTC TGGATGAGTT TGGTTGTTCG TTAGGAAAAG TCTGGCACCC TAAACTTGGT AGTACTACTT ATATTAGAAG GAAACAGCTT GAGCTGGCAG AAAGTGAAGA AGGTACTGAA CTGGTAAAAG AATTTATGCT TGATAAAATA GATAATATGA TTAACCATTT ACATGATCTG GCTATAAAAC GTTCTAAATC AAAAGAGAAA TATATAAATA AGAAGATAAA AGAGATCTGT GAATTGCGTA ATAAATTAGA AAAAGTTACA GGGTATATTG AAGATGTAAG AAATACTATA ATGGGGTATG AAGGTAATAT ATCCAGGAAG TATTTTGCCA GCTTAAGTTT TCTTTTGCCA GATAGATATA AGTTTAATGG CAGGAGTTTC AGACCTGCTG AGGATGAATT TAATTGTTTG CTGAATTATG GTTATGGTGT ATTATATGGC AAAGTAGAAA AAGCATTAAT TATTGCAGGG TTAGATCCTT ATGTTGGCAT TCTACATACT GATGGTTATA ATAAAAAGTC TTTTGTCTTT GATTTTATTG AACCCTACCG ACACCATATA GACAGAGTAG TAATGAAGTT ATTTAGTAGA AAAAAAATCC GTAAGTTACA TTTTGATAAA ATTCAGGGAG GATTAACTCT TAACGATGAA GGAAAAAAAT TGCTTCTTAC AGAATTAAAT GATTATTTTG ATAAAAAAAT TAGATATAAG GGGAGAGAGA TAAAAATTAA TAATACGATT CAGTATGATT GTCACTCCCT GGCCAACAGA ATTATAGAGG AAGGTTGA
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Protein sequence | MQLVINTYGS YLHVKQKSFE IKTEEDKKRV SAKKVSSILI TTGAAISTDA VKLALENNIE IQFLDEFGCS LGKVWHPKLG STTYIRRKQL ELAESEEGTE LVKEFMLDKI DNMINHLHDL AIKRSKSKEK YINKKIKEIC ELRNKLEKVT GYIEDVRNTI MGYEGNISRK YFASLSFLLP DRYKFNGRSF RPAEDEFNCL LNYGYGVLYG KVEKALIIAG LDPYVGILHT DGYNKKSFVF DFIEPYRHHI DRVVMKLFSR KKIRKLHFDK IQGGLTLNDE GKKLLLTELN DYFDKKIRYK GREIKINNTI QYDCHSLANR IIEEG
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