Gene Hore_14980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14980 
Symbol 
ID7313091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1598885 
End bp1599604 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content38% 
IMG OID643611941 
Productglycosyl transferase family 2 
Protein accessionYP_002509243 
Protein GI220932335 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00134453 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAT TAATAATAAT TCCGACATAT AATGAAAGGG AGAACATTAA AGACCTCTTA 
AGAGAAGTCT TTAATATTAA TGAAGATATA GATATTCTGG TGGTAGATGA TAACTCACCT
GATGGCACCG CTGAATTAGT AAAGGAACTT AAAGAACAGA AATATAAAAC AAGACTTCAT
TTACTGGTAA GGGAGGGCAA GCTGGGACTG GCCTCGGCCT ATATAACCGG GTTTAAGTGG
GCATTGAAAC ATAATTATCA ATACATCTTT GAAATGGATG CCGATTTTTC ACATAACCCT
GTTTATATAC CTGACTTTTT AGAGAAACTA AAAAACTATG ATCTGGTCCT TGGAAGCCGC
TATGTTGAAG GTGGAGGAGT AAAAGACTGG GGACTTATAA GAAAAATTAT GAGCCGGGGT
GGCAGTCTCT ATGCCCGGTT AATCTTAAAC CTCCCCTACC ATGACCTGAC CGGAGGATTT
AAGGGATTCA GGCGTGAGGT CCTGGAAGCT ATAGACCTTG ATTCAGTTAA ATCAGAGGGG
TATTCTTTTC AAATTGAAAT GACCTATCGG GCTCATCTCA AAGGTTTTAA TATTAAGGAA
ACACCTATTA TCTTCGAAGA TAGAACCCTG GGCAAATCCA AAATGTCCAA AAAAATATTT
ATGGAAGCTG TATTTATGGT CTGGTGGCTC AGATTCCATA AAAGGCAATT AATGGCCTAG
 
Protein sequence
MKTLIIIPTY NERENIKDLL REVFNINEDI DILVVDDNSP DGTAELVKEL KEQKYKTRLH 
LLVREGKLGL ASAYITGFKW ALKHNYQYIF EMDADFSHNP VYIPDFLEKL KNYDLVLGSR
YVEGGGVKDW GLIRKIMSRG GSLYARLILN LPYHDLTGGF KGFRREVLEA IDLDSVKSEG
YSFQIEMTYR AHLKGFNIKE TPIIFEDRTL GKSKMSKKIF MEAVFMVWWL RFHKRQLMA