Gene Hore_14900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_14900 
Symbol 
ID7313081 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1586726 
End bp1587325 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content45% 
IMG OID643611931 
ProductGTP-binding protein HSR1-related 
Protein accessionYP_002509234 
Protein GI220932326 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.527689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTA AAAATCCTAG GTTTGTTATC AGTGCCTATG ATTTTGATGA TTTTCCAACC 
CATAACTGGC CTGAATTTGC CTTTTCCGGA CGTTCCAATG TCGGAAAGTC TTCCCTTATA
AATACCCTTG TAAACAGACG CAAACTGGCC CGTACCAGTT CCCGGCCCGG GCGGACCCAG
AGTATTAACT TCTTCAACAT TGATGACCGT TTTTATCTGG TAGACCTGCC GGGGTATGGT
TTTGCCAATG TTCCCCGTAA GGTAAAAGAA GAGTGGGGCA GGCTTATTGA GGGTTACCTC
AATAACCGCC CCAACCTGGC CGGAATTGTC CAGATAGTTG ATGCCCGCCA TAAACCAACC
CGGGATGACC TGATGATGGT TGACTGGATA AAGGCCAGTG GTATCCCTTG TCTTATTGCT
GCCACCAAGG TTGATAAAAT ATCAAGGGGT TCCCGCAAAA AACAGGAGGA ACTTATTAAA
AAGACCCTGG TACTGGAGGA CTTTGACGGT CAGTTTACCT TTTTTTCAGC TAAAACGGGG
GAAGGAAAAA AGCAGGTTGG GAAATTTATA CTGGACCTGG TTGATAGTTT TAAAGGTTAA
 
Protein sequence
MKIKNPRFVI SAYDFDDFPT HNWPEFAFSG RSNVGKSSLI NTLVNRRKLA RTSSRPGRTQ 
SINFFNIDDR FYLVDLPGYG FANVPRKVKE EWGRLIEGYL NNRPNLAGIV QIVDARHKPT
RDDLMMVDWI KASGIPCLIA ATKVDKISRG SRKKQEELIK KTLVLEDFDG QFTFFSAKTG
EGKKQVGKFI LDLVDSFKG