Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_14530 |
Symbol | |
ID | 7313993 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1544382 |
End bp | 1545236 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643611893 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_002509197 |
Protein GI | 220932289 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000102365 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA AGAAAGCAAC CCCTAAAATT ATATTAAACA TTGTAATTAT AGTCTTTATG TTGGTCTGGA TTTTACCAAC ACTGGGGCTT TTGATTACTT CCTTCCGTCC AGCCCAGGAT GTAAGTAAAA CTGGATGGTG GAGTGTTTTA AGCAGTCCCC TTAAATTTAC CCAGTTTACT GTTGAAAATT ACCAGAAGGT ACTGGGACAG GGTGGAATGG CTATGGCCTT TAGAAACAGT TTTTTGATAA CTATTATGGG AACCCTTATA CCTGTTGCAG TTGCTGCCTT TGCAGCCTTT GGCCTTTCCA GATTACATTT TAAAGGTAGA AGTTTCTTTT ATGGTTTAAT TGTAAGTCTA CTGGTAGTAC CCCTCCAGAT GACCTTTATA CCTGTTTTAA AATTATATAA TACCCTGAAC CTGTCGGGTT CCTTTGTGGG ATTATGGCTG GTTCACACTG GTTATGGCCT ACCATTTGCT GTATTTATGC TTCATAATTT CTTCCAGTCT TTACCCCAGG ACCTTTTTGA AGCTGCCTAT ATAGATGGGG CTTCTGTCTG GACTGTTTTT TATAAACTGG CGTTACCGTT ATCAGTTCCA GCCATTGCTT CCCTGATTAT ATTCCAGTTC CTGTGGGTCT GGAATGACCT TTTGGTGGCT TTAATATACC TTGGTGGCTT TGACAGGGTA GCTCCACTTA CTGTTAAGTT ATCAAGTCTG GTTGGTTCCT ATGGTCAGAA CTGGCACCTC TTAACATCAG CTGCCTTTGT TTCTATGATT GTTCCTTTGA TAATATTCTT TACTTTACAG CGGTACTTTG TTAGAGGTAT TCTGGCTGGT TCAGTTAAAG GTTAA
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Protein sequence | MNLKKATPKI ILNIVIIVFM LVWILPTLGL LITSFRPAQD VSKTGWWSVL SSPLKFTQFT VENYQKVLGQ GGMAMAFRNS FLITIMGTLI PVAVAAFAAF GLSRLHFKGR SFFYGLIVSL LVVPLQMTFI PVLKLYNTLN LSGSFVGLWL VHTGYGLPFA VFMLHNFFQS LPQDLFEAAY IDGASVWTVF YKLALPLSVP AIASLIIFQF LWVWNDLLVA LIYLGGFDRV APLTVKLSSL VGSYGQNWHL LTSAAFVSMI VPLIIFFTLQ RYFVRGILAG SVKG
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