Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_14000 |
Symbol | |
ID | 7313940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1489608 |
End bp | 1490372 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 643611840 |
Product | Xylose isomerase domain protein TIM barrel |
Protein accession | YP_002509144 |
Protein GI | 220932236 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.50908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAGATAG GTATCGGATG TAGTCTAGAG GAGTTGAACA ATAATAAAGA TTTTGCAAAG TTTAAAGTAA TAAATATTGA AAATCCTCTA TATCCAGGTT ATCTGGAAAA AGCTACAGAA AAGGATATTA AATCAATTAA TAAAATGACT AAATACAGAT ACATAGTTGA CGGTGCATAT ATTGATTTGA ATCCTGGAAC CAGTGAGCCA AAGATTAAAG ATATAACTAT GCAGAAAGTT ATTGAGTCAA TTAATTTTGC CCAGGAAATA GGTGCAGAGG AAGTTATTTT TTTATCAACT TTCTTACCTT TTATAAAAGT GGATTTTTAC GAAAAGGGAT GGATCGAAGC CTCAAAAAAG TTCTGGGAAG AAGTATTAAA TAAATATAAA GATATAAGAA TATCGTTATG TAATACTTTT GAATTTAATC CTGATTATTT AATAGAAATA GTAGATTATG TTGATAAGGG GAATTTTGGT CTTGCCTTTG ACATTGGCCA TGCTATTTTG TGGGGGCAGG AATCATTGGT AAGCTGGTTT GATAAGATTA AAAGGTATAT CAAGACAATT TATCTCCATA GTAATGATGG TGAAGGGGAT TTGCATCTTA GTTTTAGGCA GGGCAAACTT CAGGAAAAAG AAATTAAGTT CGAAGAGTTA TTGCAGCAAT TAAAAGGAGA AAAATATAAT CTTATACTAA AATACTTTGA TAAGAGTAGT GTTATAGCTG ATAAAATTGA ACTGGAGAAA TTACTTGGGT CATAA
|
Protein sequence | MEIGIGCSLE ELNNNKDFAK FKVINIENPL YPGYLEKATE KDIKSINKMT KYRYIVDGAY IDLNPGTSEP KIKDITMQKV IESINFAQEI GAEEVIFLST FLPFIKVDFY EKGWIEASKK FWEEVLNKYK DIRISLCNTF EFNPDYLIEI VDYVDKGNFG LAFDIGHAIL WGQESLVSWF DKIKRYIKTI YLHSNDGEGD LHLSFRQGKL QEKEIKFEEL LQQLKGEKYN LILKYFDKSS VIADKIELEK LLGS
|
| |