| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_13880 |
|---|
| Symbol | |
|---|
| ID | 7314176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1479115 |
|---|
| End bp | 1481037 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 643611828 |
|---|
| Product | pullulanase, type I |
|---|
| Protein accession | YP_002509133 |
|---|
| Protein GI | 220932225 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
|---|
| TIGRFAM ID | [TIGR02104] pullulanase, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA ATAAAAAGGA TTTCGAAACG TCAACTGAAA TAGCAGTCAA AAAAAAGGGT
TTTTACTACG GTGGGGATGA TCTCGGGGTT TTATACACCC CTTCAAGGAC TACCTTCAGG
TTCTGGTCTC CCCTGGCCAG GTGGGCTAAA GTTTATATTT TTTCTAATGA AAATTCTGAA
AACCCTGAGA TTGTTTCTGA CTTCAAAAAA GAAGCCGGGG GTAGCTGGGT TGCTGAAGTT
TCAGGTGATT TGGAAGGCAA GTATTATATT TATGAACTAG AGGTTAATGG CAAAGTTAAT
AGAGTAGTGG ACCCCTATGC CAGGGCTTTA AGCACCAATA GTAAGAGGGG ATTAATTGTT
AATATGGATA AAACAAACCC TCCGGGGTGG GAAAAAGATG AGAGGGTAAC CTTACAAAAA
CCCCAGGATG CAATAATTTA TGAAGTTCAT GTCAGGGATT TTTCATCTTC CCCCCATTCG
GGTATTGTAA ATAAAGGTAA ATATCTTGCT TTTACTGAAG GGGGTACTAC TGGTCCTGGT
GGGGTGAAAA CCGGGCTAGA TCACTTAAAG GAACTGGGCG TTACCCATGT TCATTTATTA
CCCGTCTTTG ATTTTGGAAG TGTTGATGAT CTTAATGATA AAGAGTATAA CTGGGGTTAT
GACCCCCTGT TTTATAATAC ACCGGAAGGT TCATATTCCA CCAACCCTTC AGATGACTCC
CGTATAAAAG AATTTAAGCA GTTAGTAAAA TCTTTACACG AAAATGGTAT CGGGGTTATT
ATGGATGTTG TTTACAACCA CACCTACTAT ACGCGCAAAT CGGCCTTTGA TTTAATTGTA
CCTCAGTATT ATTACAGGTT TGACCATGAT GGGAATTATT CCAATGGGTC AGGATGTGGT
AATGAGGTTG CTTCTGAAAA GCCAATGGTT AGAAAATTTA TTATTGATTC TGTTAAATAC
TGGGCTGAGG AATACCATAT AGATGGTTTC AGGTTTGACC TTATGGCTTT AATTGATCGG
GAAACTATAA AACATATAGA ACATACATTA CATGAAATTG ATCCTTCGAT TATTATATAT
GGTGAACCCT GGACCGGGGG ATTGACAACC CTTGATCCAG AAAGACAGTT GCTTAAAGGG
GCCCAGAAGG GTATGAAAGT TGCTGTTTTT AATGATAATT TCAGGAATGC TATAAAAGGT
GATAACGATG GTTTTGGTAA GGGTTTTGCC TCCGGAGCCC CGGGTTTAGA GCATGCCATA
AAAAGGGGTG TCGTCGGGGC TATATATTAT AATGATGAGA TAAATGATTT CTCCTCAGAA
CCCCGGGAGA CAGTTAATTA TGTTTCCTCC CATGATAACT TAACCCTCTG GGATAAACTG
TGTAAGTCCA ACGGTGAAGA TGAAGAATGG GTAAGAATAA GGATGGACCA TTTAAGCCAG
GCTATAATTT TTACTTCCCA GGGTGTGGCT TTTATACAGG GTGGGGAGGA ATTTTTGAGA
ACCAAATTTG GCAACCATAA TAGTTATAAT GCCGGTGATG AAGTAAACCA GCTCAAGTGG
GAACGGAAAA GTAAGTATCT TAAAACATTT AAGTATTATA AAGGTTTAAT TACTTTAAGA
AGAGAACATC CGGCTTTCAG GATGACAAAT GCTGAACAAA TCAGGAAAAA ACTTGAGTTT
TTAGAAACAC TTCCAAATAC GGTAGGGTTT ATATTAAAAG ATTATGCTAA CGGGGATAAC
TGGAAAAACA TAGTGGTACT CTATAACCCT AACAGGGAAG CAATAACCTT TAACTTGCCC
TATGAGGGAG CATGGAATGT AGTAGTGTAT GAAGAAGAAG CCGGTACCGA TACTATTTTT
ACTGTAAAAA ATGGAGAAGT AAAGGTACCC CTTATTAGTA CAGTTGTACT TTATCAAGAT
TAG
|
|---|
| Protein sequence | MKKNKKDFET STEIAVKKKG FYYGGDDLGV LYTPSRTTFR FWSPLARWAK VYIFSNENSE
NPEIVSDFKK EAGGSWVAEV SGDLEGKYYI YELEVNGKVN RVVDPYARAL STNSKRGLIV
NMDKTNPPGW EKDERVTLQK PQDAIIYEVH VRDFSSSPHS GIVNKGKYLA FTEGGTTGPG
GVKTGLDHLK ELGVTHVHLL PVFDFGSVDD LNDKEYNWGY DPLFYNTPEG SYSTNPSDDS
RIKEFKQLVK SLHENGIGVI MDVVYNHTYY TRKSAFDLIV PQYYYRFDHD GNYSNGSGCG
NEVASEKPMV RKFIIDSVKY WAEEYHIDGF RFDLMALIDR ETIKHIEHTL HEIDPSIIIY
GEPWTGGLTT LDPERQLLKG AQKGMKVAVF NDNFRNAIKG DNDGFGKGFA SGAPGLEHAI
KRGVVGAIYY NDEINDFSSE PRETVNYVSS HDNLTLWDKL CKSNGEDEEW VRIRMDHLSQ
AIIFTSQGVA FIQGGEEFLR TKFGNHNSYN AGDEVNQLKW ERKSKYLKTF KYYKGLITLR
REHPAFRMTN AEQIRKKLEF LETLPNTVGF ILKDYANGDN WKNIVVLYNP NREAITFNLP
YEGAWNVVVY EEEAGTDTIF TVKNGEVKVP LISTVVLYQD
|
|---|
| |