| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_13010 |
|---|
| Symbol | |
|---|
| ID | 7313622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halothermothrix orenii H 168 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011899 |
|---|
| Strand | - |
|---|
| Start bp | 1395989 |
|---|
| End bp | 1396921 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643611741 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002509046 |
|---|
| Protein GI | 220932138 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 48 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGATAGAGG TTAAGCAAGT AACTAAAAGG TATGGGGAAA AAGTAGCACT GAAAGGAATC
AATTTTAAAG TAGGTAAGGG TGAAATTATC GGGTTTTTAG GACCCAATGG GGCGGGCAAG
ACTACTACTA TGCAGATTAT TACCGGGTAT ATCCCACCAA CTTCTGGTGA AGTTAAGGTA
GGGGGATTTG ATACCTTTAA AAACCCTCTG GATGTTAAAA GGTTGATCGG TTATTTGCCT
GAAAATCCGC CTTTATATCC GAATATGACC GTATACAGGT TTTTGAAATT TATTGCTGAA
CTCAAAGATA TACCCCGTGA CCAGCATGAT AAAGAACTGG ACAGGGTTAT GGAAGTGATA
AGTATTAAGG ATGTTAGAAA CAGGTTAATT AAAAATTTAT CAAAGGGGTA CAAGCAGAGG
GTCGGTCTTG CCCAGGCTTT AATAGGGGAC CCGGAAGTTC TTATTCTGGA TGAACCTACT
TCTGGACTTG ACCCCAGGCA GATTATCGAA ATTAGAAATT TAATTAAGGC CTTAAGTACC
GATAAGACAA TTATCCTTAG TTCCCATATT TTACCTGAAG TTAATATGAT TGCCGAAAGG
GTTCTAATTA TTAATGAAGG GGAAATTGTG GCTCAGGACA CACCATCCAG TCTTTCCAGG
AGATTGCGCC ATGGAGAAGT ATTACAGGTA GAAATAGATG GAGATAAAGA CCAGATAAAA
AAAGAAATTG AGGAATTAGA TGGTGTGAAA CAGGTTGATC TTAAAGAAGG TAAATTTAAC
ATAGAAACCG GTCATAAGGG TGATGTCAGG AGAAATCTCT TCTTTAAAAT GGCAGAATTG
GGTTACCCTA TTCTGGAAAT GAAAACTATA GATCTTAGCC TGGAAGAAAT ATTCCTCCAG
TTAACAACTG AAGAAGAGGA GGTTTTAAAA TGA
|
|---|
| Protein sequence | MIEVKQVTKR YGEKVALKGI NFKVGKGEII GFLGPNGAGK TTTMQIITGY IPPTSGEVKV
GGFDTFKNPL DVKRLIGYLP ENPPLYPNMT VYRFLKFIAE LKDIPRDQHD KELDRVMEVI
SIKDVRNRLI KNLSKGYKQR VGLAQALIGD PEVLILDEPT SGLDPRQIIE IRNLIKALST
DKTIILSSHI LPEVNMIAER VLIINEGEIV AQDTPSSLSR RLRHGEVLQV EIDGDKDQIK
KEIEELDGVK QVDLKEGKFN IETGHKGDVR RNLFFKMAEL GYPILEMKTI DLSLEEIFLQ
LTTEEEEVLK
|
|---|
| |