Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_12560 |
Symbol | |
ID | 7313577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1349170 |
End bp | 1350432 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 643611696 |
Product | putative membrane CBS domain protein |
Protein accession | YP_002509001 |
Protein GI | 220932093 |
COG category | [R] General function prediction only |
COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATATA ACGGTATTGG GTTAATCATA TTATTTATTT TATCTGGATT TTTTTCCGGT GCAGAAACTG CTTTGATGTC AGTTAATAGG ATTCGTATTA AAGAACTGGC CAATCAGGGC GATAAAAGGG CAAGGCTGGT CGACAGTCTT TTAAATAATA AAACCAGATT ATTGACCACT ATTTTAATAG GTAATAACCT GGTTAATATA TGGGCCTCGG CCATTGCTAC ATCTATAGCC ATTTCCCTGT TTGGTAACAA AGGTGTCGGG ATCGCTACAG GTGTTGTTAC CCTGCTGGTT CTTATCTTTG GTGAGATAAC TCCTAAAGCT ATGGGGAGTA AAAAGGCAGT CCGGTACTCA AAATTTAGTT CAATTTATTT ATACTGGCTG GAAAGGGTTC TTTATCCAGT GGTTGTTTTT TTTGAGTATT TAATAAAAAT ATTTGTTGAT AATGAAGATC TTCTATCATC AAAATTATTG AGTGAAGAAG AGATTAAACG GTTTGTAAAT GTCAGTGAAG AAGAAGGGGT CATCAAAACC GATGAACGTA GAATGATAAA TAGTATTTTT GAATTTGATG ATACAACGGT TAAGGAAATA ATGGTTCCCA GAATAGATAT GGTCTGTATT AAAAGTGATA CTGAACTCTC TGAAGTTATA AAAATAGCTG TAGACAGGGG TCATTCCCGT ATTCCGGTTT ATAAAAATAC TATTGATGAA ATAATCGGTG TAGTTTATGT TAAAGATTTA CTCGGGTATT TAACCAAACC TGAGAATGAT GCCAGACTGG CTGATTTTAT AAGGTCTCCT TATTATGTTC CTGAAAGTAA GAAAATTAAT GAACTCTTAA CAGAAATGAA GAAAAAGAAA GTCCATATGG CCATTGTTCT TGATGAGTAT GGGGGAACAT CGGGTCTGGT CACCATTGAA GATATCCTGG AAGAGATTGT CGGGGATATT CAGGATGAAT ATGATACTGA GCCCAGCCAG ATAGAATTTA TCAATGATAA AGAATTATTA ATTGATGCCC GGGTAGATAT AGATGACCTT AACGAGATCC TTCCAGAACC ACTACCAGGG GAAGAAGATT ATGAAACTAT TAGTGGGTTT ATTTTACATT ATCTGGGGTA TGTCCCCAAA ACGGGTGAAG AGCTTGAGCT GGATGGACTT CATATCCTGG TAGAAGAAAG CAGCAAACAT CAGATTAAAA AAGTCAGGTT AAAAAGTTCT ACCAAACTTA ATAGAATAAA GGAAGGGGGG TAA
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Protein sequence | MIYNGIGLII LFILSGFFSG AETALMSVNR IRIKELANQG DKRARLVDSL LNNKTRLLTT ILIGNNLVNI WASAIATSIA ISLFGNKGVG IATGVVTLLV LIFGEITPKA MGSKKAVRYS KFSSIYLYWL ERVLYPVVVF FEYLIKIFVD NEDLLSSKLL SEEEIKRFVN VSEEEGVIKT DERRMINSIF EFDDTTVKEI MVPRIDMVCI KSDTELSEVI KIAVDRGHSR IPVYKNTIDE IIGVVYVKDL LGYLTKPEND ARLADFIRSP YYVPESKKIN ELLTEMKKKK VHMAIVLDEY GGTSGLVTIE DILEEIVGDI QDEYDTEPSQ IEFINDKELL IDARVDIDDL NEILPEPLPG EEDYETISGF ILHYLGYVPK TGEELELDGL HILVEESSKH QIKKVRLKSS TKLNRIKEGG
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