| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_12190 |
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| Symbol | |
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| ID | 7313920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1311784 |
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| End bp | 1313934 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 643611658 |
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| Product | (p)ppGpp synthetase I, SpoT/RelA |
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| Protein accession | YP_002508964 |
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| Protein GI | 220932056 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
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| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000000855141 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCTTA AGAATTTATT ATTGAAAATA AAAGAATATA CTACAAATCC TGATCTGGAA
CTGGTAAAAA GGGCTTACAA TTTTGCTAAA GATGCTCATG AGGGACAGTT CCGGGTTTCA
GGAGAACCCT TTATAGAGCA TCCCCTCGGG GTTGCCTGTA TTCTGGCCGA GTTAGAACTT
GATATTATTT CTATCTCGGC TGCTTTATTA CACGATGTTG TTGAGGATAC TTCAGTTACC
AGTAAAAATA TAGAAGAAGA GTTTGGAGAT GAAATAGCCC TGTTAGTGGA TGGTGTGACC
AAACTGACCA GGCTTGAGTT TAAATCAAAA GAAGAACATC AGGCCGAAAA TTTACGGAAA
ATGTTTCTGG CCATGTCTGA GGATATAAGG GTGGTTTTAA TAAAACTGGC TGACAGGCTT
CATAATATGA GGACCTTACG CTTTCTTGCG AAGGAAAAAC AGGTAGAGAA GGCTAAAGAA
ACCCTGGAAA TATATGCTCC TCTGGCTCAC CGCCTTGGAA TGTCCAGATT AAAATGGGAG
CTTGAAGATT TGAGTTTTAG ATTTATTGAT TCCAAAATGT ATTATGAAAT TGCAGAAAAA
GTTGCTGCCA ACCGTAAACA GAGAATTAGA GATATAAAGG AAGCTATAAA AATTCTTAAT
GATAAACTGG GTAACCAGGG AATACTGGCA GAGATATATG GTCGGCCTAA ACATCTTTAT
AGTATATATC AAAAAATGAA AAGAAAAGAA GTTGATTTTA ATGAGATATA CGACCTGACA
GCAATTAGAA TTATTGTAAA TTCTGTTAAA GAATGTTATG AAGTCCTGGG AATAGTTCAT
GAAATCTGGA AACCTATTCC CGGTCGCTTT AAAGATTATA TTGCCATGCC TAAATCAAAT
ATGTATCAAT CCCTTCATAC AACAGTAATC GGTCCCAAAG GGGATCCCCT GGAGGTTCAG
ATCAGGACAC CGGAAATGCA CAGGACGGCT GAATATGGTA TTGCTGCCCA CTGGAAATAT
AAAGAGGGGA AAACCGGTAA AGATGATTTT GAAGAAAAAC TCTCCTGGTT GAGGCAGATA
CTGGAGTGGC AGAAAGACCT CAAAGAACCC CAGGAATTTA TTGAAAACTT AAAGATTGAC
CTCTTTGAAG ATGAAGTTTT TGTTTTTACA CCAAAGGGTG ATGTCATTTC TCTTCCTACA
GGGAGTACCC CCGTTGATTT TGCCTACAAT ATTCATACAG AAGTGGGTCA TAGCTGTGTT
GGAGCCAAAG TTAACGGGAA AATTGTCCCC CTTGAATACC GTATGAGCAA TGGTGATATT
GTAGAAATAT TGACTTCGAA AAATAGTACA GGTCCCAGTC GTGACTGGTT AAAGTTTGTA
AAAACATCAA GGGCAAGAAG TAAGATAAAA AGGTGGTTTA AACAGCAGGA AAGGGACCAG
ATAATACAGA GAGGTAAGGA ATTATTTGAT CGGGAGTTAA AAAGACTTAA TGTGGAACTT
AAAGAGGATG CAAAAGAAAA AGAACTGGTT GAAATAGCCC GAAAAATGGG GAAAAATAAT
GCCGATGAGC TTTTTGAGGT CATTGGTTAT AATCAGGTTA GCCCCAAAAC TATTATAAAT
AAACTGCCTT CAGTCCAGAT TAAAGAAGAG AGCCAGCTTG AGAAACTGAA GAAAACTCCC
AGGAGGAGAA AGTCTACCAG TAAAGGTGTA AAGGTTGAAG GAATGGATGA TCTACTTGTT
AGAATTGCTA AATGCTGTAA TCCCGTTCCT GGTGATAAAA TAATCGGGTA TATTACCAGG
GGAAGGGGGG TTTCCGTTCA TCGTACTGAT TGTCCCAATC TTCTACAATT ATCAAAACGG
GATAAAAACA GGTTAATAAA TGTTTACTGG AATAACTACA GGACTGATTC TTATGAAGTT
AACCTGGTTA TAGATGCATT TAACAAAAAG GCTCTGTTAA ATGATATTAC TTCTCTTATT
AAAGAAGAGG ATGTTAATCT GTTATCGGTC ATGGCCAGGA CTGACCGTTA TAACCGGGCC
AAAATTGAAT TATCACTGGA GTTAAGCAGT CTGGAGCATA TGAGGGATAT TATAAATAAA
CTTGAAAAAA TAACTGGTGT TCTTTCTGTT AAACGGGCAA AACCAACCTA A
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| Protein sequence | MQLKNLLLKI KEYTTNPDLE LVKRAYNFAK DAHEGQFRVS GEPFIEHPLG VACILAELEL
DIISISAALL HDVVEDTSVT SKNIEEEFGD EIALLVDGVT KLTRLEFKSK EEHQAENLRK
MFLAMSEDIR VVLIKLADRL HNMRTLRFLA KEKQVEKAKE TLEIYAPLAH RLGMSRLKWE
LEDLSFRFID SKMYYEIAEK VAANRKQRIR DIKEAIKILN DKLGNQGILA EIYGRPKHLY
SIYQKMKRKE VDFNEIYDLT AIRIIVNSVK ECYEVLGIVH EIWKPIPGRF KDYIAMPKSN
MYQSLHTTVI GPKGDPLEVQ IRTPEMHRTA EYGIAAHWKY KEGKTGKDDF EEKLSWLRQI
LEWQKDLKEP QEFIENLKID LFEDEVFVFT PKGDVISLPT GSTPVDFAYN IHTEVGHSCV
GAKVNGKIVP LEYRMSNGDI VEILTSKNST GPSRDWLKFV KTSRARSKIK RWFKQQERDQ
IIQRGKELFD RELKRLNVEL KEDAKEKELV EIARKMGKNN ADELFEVIGY NQVSPKTIIN
KLPSVQIKEE SQLEKLKKTP RRRKSTSKGV KVEGMDDLLV RIAKCCNPVP GDKIIGYITR
GRGVSVHRTD CPNLLQLSKR DKNRLINVYW NNYRTDSYEV NLVIDAFNKK ALLNDITSLI
KEEDVNLLSV MARTDRYNRA KIELSLELSS LEHMRDIINK LEKITGVLSV KRAKPT
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