Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_12030 |
Symbol | |
ID | 7313904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1297675 |
End bp | 1299027 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643611642 |
Product | recombination factor protein RarA |
Protein accession | YP_002508948 |
Protein GI | 220932040 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.51 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGTAATTA TTAATCTTTT TGAACAAAAT TCTGAGAGTA ATGACAAAAA TAGACCACTG GCTTATCGAA TGCGGCCGGG AAACCTCGAT GAATTTTATG GACAGGAAGA TGTGATTGGG CCGGGGAAAC CACTGCGCCG GGCCATTGAA GCTGACCGGG TCCAGTCTTT AATATTATAT GGTCCGCCCG GTTGTGGTAA GACGAGTCTG GCTCAAGTAA TTGCCAGAAA AACAGAGGGT AAATTTATAA GAATTAATGC TGTGACTTCA GGGGTAAGCA AAATCAGGGA AGTCATAGAT AAAGCAAGTA AAAACCGCTC TCTTCATGGC ATTAAAACTA TTTTATTTAT TGATGAAATC CACCGTTTTA ATAAATCACA ACAGGATGCC CTTTTGCCTG CAGTTGAAAG TGGAACCATA ACCCTTATCG GGGCAACAAC CGAAAACCCT TATTTTGAAG TAAACTCACC ACTTTTATCA CGCTCCCGGA TAGTTCGTTT AAAACCACTG AAAAAAGAAG ATATAATTAA AATTTTAAAA AATGCCCTTA ATAATGAAGA GAGGGGTCTA GGGAATTATA ATATAGATAT AAGTCAAGAT GCCCTCCAGT ATTTAGCTTC AATTGCCGGT GGTGATGCCA GAACTGCTTT AAATGGACTG GAAATTGCTG TTCTGACTAC CCCTCCTGAT AAAGAGGGAA TTATACATAT TAATAAAAAT ATTATTTCTG AGTCGCTACA AAAAAAGCTA CTTAAATACG ATAAACAGGG GGATAACCAT TATGATGTAG TTTCTGCTTT TATAAAGAGT ATGAGAGGGT CAGATCCCGA TGCTGCCCTT TTCTGGTTGG CCAGAATGCT GGAATCAGGT GAAGACCCCC GTTTTATAGC CAGAAGAATT ATTGTACATG CTGCTGAAGA TGTGGGTATG GCTGACCCTA TGGCTCTTGT TGTTGCTACT TCAGCTGCCA ATGCTGTTGA ATATGTAGGT TTACCTGAAG CCAGAATTCC CCTGGCTGAG GCTGTAATAT ATATTGCTAC AGCCCCTAAA AGTAATTCAG TCATAACAGG TATTGATGCT GCTTTAAATT ATGTAAAAAA TAATGATACT GGGGAGGTGC CTCTTCACTT AAGGGATGCC CATTATAAAG GAGCCAGAAA TCTAAAACAC GGGTTAGGAT ATAAATATCC CCATGATTAT CCCTACCATT ATGTTAAACA ACAATATGTC CCTGATGAGG TAACTGGAAC AGAGTTTTAT AAACCCGGTC AGCAGGGCCG GGAGAAAAAG ATAAAGCAGA GGCTTGATTT TTTAAAAAAT CTTAATAGTA ATGATGATGT AGAGGGTAAA TAG
|
Protein sequence | MVIINLFEQN SESNDKNRPL AYRMRPGNLD EFYGQEDVIG PGKPLRRAIE ADRVQSLILY GPPGCGKTSL AQVIARKTEG KFIRINAVTS GVSKIREVID KASKNRSLHG IKTILFIDEI HRFNKSQQDA LLPAVESGTI TLIGATTENP YFEVNSPLLS RSRIVRLKPL KKEDIIKILK NALNNEERGL GNYNIDISQD ALQYLASIAG GDARTALNGL EIAVLTTPPD KEGIIHINKN IISESLQKKL LKYDKQGDNH YDVVSAFIKS MRGSDPDAAL FWLARMLESG EDPRFIARRI IVHAAEDVGM ADPMALVVAT SAANAVEYVG LPEARIPLAE AVIYIATAPK SNSVITGIDA ALNYVKNNDT GEVPLHLRDA HYKGARNLKH GLGYKYPHDY PYHYVKQQYV PDEVTGTEFY KPGQQGREKK IKQRLDFLKN LNSNDDVEGK
|
| |