Gene Hore_11900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11900 
Symbol 
ID7313888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand- 
Start bp1284645 
End bp1285214 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content34% 
IMG OID643611626 
Product2'-5' RNA ligase 
Protein accessionYP_002508935 
Protein GI220932027 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value5.56695e-18 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGTTAT TTATTGCTGT TAATATTCCT GACAGGACAA AAGACCTTAT AGAACGTAAA 
CTCATCACTA TTAAAAGGCA GGTTAGACAG GGTATAAAAT GGGTCAAAAA AGATAACTGG 
CATATAACCC TGAAATTCAT AGGAGAGGTG GGGGATGAGA AAGTCTCCGA AATAAAGGAT 
TCTTTAGAAA GTATTTCAGA GAGAGTAAAA CCGTTTTCTA TTACAATTAA TGGCCCTGGG 
GCTTTTCCAG ATATCACAAG GCCAAGGGTA ATGTATTTAA GTATTAAAGA AGGTAGTGAT 
AACCTGACTT CTGTCTATAA ACTGTTAGAA AAAGACTTAA TAGATAGAGG ATTTAAAGCC 
GATGATAGGG AATTTACTCC ACATCTTACT CTGGCCCGGA GCAGGCGAAG AACTGATCTT 
AACCAGTTAT CTAAACGTCT TAATAAAGTA GTAGAAAGTC TTGAAGATTT TAAAGCCAGA 
GTAAATATAA ATAAACTGAG TTTGATGAAA AGTGAGCTTT ATAGAACAGG ACCAGTGTAT 
AAAGAAATAT TTTCAGTTTT TTTAGAATAA
 
Protein sequence
MRLFIAVNIP DRTKDLIERK LITIKRQVRQ GIKWVKKDNW HITLKFIGEV GDEKVSEIKD 
SLESISERVK PFSITINGPG AFPDITRPRV MYLSIKEGSD NLTSVYKLLE KDLIDRGFKA 
DDREFTPHLT LARSRRRTDL NQLSKRLNKV VESLEDFKAR VNINKLSLMK SELYRTGPVY 
KEIFSVFLE