Gene Hore_11760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_11760 
Symbol 
ID7313874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1272828 
End bp1273421 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content39% 
IMG OID643611612 
Productcell wall hydrolase SleB 
Protein accessionYP_002508921 
Protein GI220932013 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3773] Cell wall hydrolyses involved in spore germination 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.0630117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAAAT ATAGTAAATC TATAGCACTA TCCTTAATAA TAATACTGAC AATTTATATT 
TTAACACCTG CATTATTCAG TTCTATATTT GTCTATAAAG CCCGGGCTAG TTCAATAGAC
AGGAAAGATG TCTATCGTGG AGTAGGCATA GCCCTACTTT TAGTACTGAT TGCTAAATTG
GGAAAAGCAG CTGAATCTAA CACGGAACCG GTGGACAACC CCAGTGACAT AAATTTATCT
GGAGAAGACA TAGAATTACT GGCCAGGGTT ATATATGCTG AAGCCAGAGG AGAACCATAT
GAAGGGCAGG TAGCTGTTGG AGCTGTTGTT TTAAACAGGG TTGAGAGCCC TGATTTTCCG
GATACTGTTA AGGAAGTAAT TTTTCAGGAT GGACAGTTTT CTTCTGTCGA TGATGGTCAA
ATTTATCTAA TTCCAAATAA AATTGCCTTT CGTGCTGCCA GGGAGGCATT AAATGGCAGG
GATCCAAGTC AGGGTGCTTT ATATTTTTAT AATCCCAAAA CAGCTAAAAC CCTCTGGTGG
CTTTCCCAGA GAAAGGTTAC CGTTAAAATC GGTAACCATG TCTTTGCAAA ATAA
 
Protein sequence
MKKYSKSIAL SLIIILTIYI LTPALFSSIF VYKARASSID RKDVYRGVGI ALLLVLIAKL 
GKAAESNTEP VDNPSDINLS GEDIELLARV IYAEARGEPY EGQVAVGAVV LNRVESPDFP
DTVKEVIFQD GQFSSVDDGQ IYLIPNKIAF RAAREALNGR DPSQGALYFY NPKTAKTLWW
LSQRKVTVKI GNHVFAK