Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_11580 |
Symbol | |
ID | 7314020 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | - |
Start bp | 1250385 |
End bp | 1250615 |
Gene Length | 231 bp |
Protein Length | 76 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 643611596 |
Product | RNA chaperone Hfq |
Protein accession | YP_002508905 |
Protein GI | 220931997 |
COG category | [R] General function prediction only |
COG ID | [COG1923] Uncharacterized host factor I protein |
TIGRFAM ID | [TIGR02383] RNA chaperone Hfq |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACC AGTTTAATCT TCAGGATAAC CTTTTAAATC AGGTCAGGAA AAAGAATGTT CCGGTAGTTA TATACCTTGT TAATGGCTTT CAAATCAAAG GTAAAGTTAC CGGTTTTGAT AATTTTACTA TTTTAATTAA CAGTGAAGGA AAGGACCAGA TGGTGTATAA ACATGCAATT TCAACTATCA TACCACAGGA AAAGGTGGAT ATCCAGTTAA GTTCAGAGTA A
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Protein sequence | MKNQFNLQDN LLNQVRKKNV PVVIYLVNGF QIKGKVTGFD NFTILINSEG KDQMVYKHAI STIIPQEKVD IQLSSE
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