| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_11320 |
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| Symbol | |
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| ID | 7312877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | - |
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| Start bp | 1226169 |
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| End bp | 1226690 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 643611570 |
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| Product | Peptidoglycan-binding LysM |
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| Protein accession | YP_002508879 |
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| Protein GI | 220931971 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.00223945 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACAAA GATGTCCGCC CAATACCAGG CCATATACCA TCAAAGCTGG AGACACCTTT
TATAGTCTGG CAAGAAGATT CAATATATCA CTTTCGGCAA TTATTTCCGC CAATCCAGAA
GCGGACCCAG AATCATTAAG GATTGGACAG AGAATTTGTA TACCCCGGCA GGAATATTAT
CCACCCTGTC CGGAAGGAAA TTTTTATACA ATAAAGAGAG GGGACACCCT TTATAGTATT
GCTCAACGGT TTAGTGTCTC CCTTGATGAC CTCCTTGAAG CTAACCCTTT TATCGTTCCG
GAGAACCTGG AGGTAGGTAC AGTCATCTGT ATACCCCTGG CCACCCCGCC GGTTGATTGT
CCCCCGGGCT CAATAACTTA TACAATAAAA AGAGGTGATA CCTTTTATTC AATAGCCAGA
AGGTATAATA TAACTGTAGA TGAATTAAGA AGAGCCAATC AGGGAATCAA TCCTGAAGCC
CTTTTGGTTG GCCAGAAAAT ATGTATTCCT GACCAGGAAT AA
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| Protein sequence | MTQRCPPNTR PYTIKAGDTF YSLARRFNIS LSAIISANPE ADPESLRIGQ RICIPRQEYY
PPCPEGNFYT IKRGDTLYSI AQRFSVSLDD LLEANPFIVP ENLEVGTVIC IPLATPPVDC
PPGSITYTIK RGDTFYSIAR RYNITVDELR RANQGINPEA LLVGQKICIP DQE
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