Gene Hore_10980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10980 
Symbol 
ID7312840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1193272 
End bp1194096 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content34% 
IMG OID643611535 
Productpeptidase M23B 
Protein accessionYP_002508847 
Protein GI220931939 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0000310987 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TTAAAAATAT AATTGTTTTA TTTGTTTTCA TTGTATTTCT TACCAGTCTG 
GTTCAGGCTG CTGAAACAAC GGTGTATACT GTAAAAAGGG GAGATACTTT ATCTAAAATT
GCTCATTATT TTGATGTTAA TATAGAGAAA ATCATCAGTT TAAATAAAAT AAACAATCCA
GATGTAATAA GGATTGGTCA AAAGATAAAA ATTCCTGTAA AAAAAGTTAC TTATCAGGTT
AAAAGAGGCG ATTCCCTATG GGAAATAGCA AAAAAATTCA GGGTTAACAT AAAAACATTA
ATTAAAATTA ATCAAATAAA AAACCCCAGG GTTATTTATG CAGGACAGAA AATAATGATT
CCAACAAATT CAGGTGAGGT CCGGTATACA CTGGCTTCCC GTTCTTATGA TTCCCATTTT
ATCTGGCCGG TTCAGGGGAG GCTTACTTCT GAATTTGGCT GGAGAATACA CCCTATCAGG
AAAGAAAAAC ACTTTCATAC CGGAATAGAT ATAGCTGTTC CCATAGGTAG TCCTGTTTAT
GCGGCAGAAG AGGGTATTGT TATTTATAGT GGGTGGAAGA ATGGTTATGG TAACCTTGTC
ATCATAAAAC ACCGGGATAA TAAACTAACA TATTATGCCC ATAATTTAAG ACTCCTTGTA
AAAAAAGGGG AGAGGGTCAA ACAGGGAAGA ATAATTGCTT TAAGCGGTAA TAGTGGTGAT
TCAACAGGAC CTCATTTACA CTTTGAAATA AGGGTAGGTA ATCGGGTAGT AAACCCACTT
CAGTATTTAA ATAAAAGGTA TTTGTTAAAT GGTTTCCGGG TCTGA
 
Protein sequence
MKLLKNIIVL FVFIVFLTSL VQAAETTVYT VKRGDTLSKI AHYFDVNIEK IISLNKINNP 
DVIRIGQKIK IPVKKVTYQV KRGDSLWEIA KKFRVNIKTL IKINQIKNPR VIYAGQKIMI
PTNSGEVRYT LASRSYDSHF IWPVQGRLTS EFGWRIHPIR KEKHFHTGID IAVPIGSPVY
AAEEGIVIYS GWKNGYGNLV IIKHRDNKLT YYAHNLRLLV KKGERVKQGR IIALSGNSGD
STGPHLHFEI RVGNRVVNPL QYLNKRYLLN GFRV