Gene Hore_10970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10970 
Symbol 
ID7312839 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp1192534 
End bp1193091 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content37% 
IMG OID643611534 
Productpredicted membrane protein 
Protein accessionYP_002508846 
Protein GI220931938 
COG category[S] Function unknown 
COG ID[COG3601] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.00000439104 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGGATA CTAATAAATT AACAGCAATC GGTGTACTGA GTGCTCTATC CTTATTGCTT 
ATGGTATTAA TAAAATTTCC CTTGATTCCT ACGGCTCCGT ATTTAATTTA TGAGCCAGGG 
GATGTACCGA TTTTAATTAT TAGCTTTGCC TATGGCCCGA TTCCAGCTTT AATTGTGACT 
TTTATTCTGT CTATTCTGAT GGCCCTTTTT ACTGGATTAG GGGGTTTATT TGGTGCAATT 
ATGCATTTCC TGGCTACCGG AACTCTGACT TTGGTAGCTG GAGTTATATA TAAGAGGAAG 
CATAACAGGA GTGGTGCTAT AACAGGTCTA CTGATGGGTT CGGTGGCCAT GACAGTAGTT 
ATGGTTATAG CCAATGTTTT ACTTGACCCC TACTTTATGG GTTTCACACG TGAACAGATT 
ATAGCCATAC TTGCCCCGGC CATTATTCCT TTTAATATTG TTAAATCATT ATTAAATTCT 
TTTATAACTT TTATTATTTA TAAAAAGATA TCCTATTTTC TTAAAGATAA GGGTCTTAAA 
GGGTTTAAGA GTGCCTGA
 
Protein sequence
MRDTNKLTAI GVLSALSLLL MVLIKFPLIP TAPYLIYEPG DVPILIISFA YGPIPALIVT 
FILSILMALF TGLGGLFGAI MHFLATGTLT LVAGVIYKRK HNRSGAITGL LMGSVAMTVV 
MVIANVLLDP YFMGFTREQI IAILAPAIIP FNIVKSLLNS FITFIIYKKI SYFLKDKGLK 
GFKSA