Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_10900 |
Symbol | |
ID | 7312832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1184147 |
End bp | 1185721 |
Gene Length | 1575 bp |
Protein Length | 524 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643611527 |
Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
Protein accession | YP_002508839 |
Protein GI | 220931931 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGGATTAG TCTCACTTTA TGATACTACA TTAAGGGATG GGGCCCAGGG AGAAGGTATT TCCTTTTCCC TGGATGATAA ATTAAAAATT GTTTATAGAC TTGATGAGCT GGGTATAGAT TACATCGAGG GTGGCTGGCC CGGATCCAAT CCCAAGGATG AGGAATTTTT TAAGAAAGTT AGAAATCTAA AACTAAATAA TGCCCGGATT GTGGCCTTCA GTTCTACCCG GAGACCGGGT ATTAAAGTTG AAAATGACTC CAATATCTTA AAATTACTGG AAGCAGGGGT TGACACCGTT ACCATTTTTG CAAAAAGCTG GGATTTCCAT GTAACCCATG CTCTCGAAAT AACCCTCGAT GACAATCTGG ATTTAATATT TGATACAGTA TCATTTTTGA AAGATAAGGG ACTTAAGGTG TTTTTTGATG CTGAGCATTT TTTCGATGGT TTTGAGGCAA ATCCTGATTA TACTCTTAAA ACAATATTAA CTGCCCAAGA TGCTGGTGCT GATCTAATCG TTTTATGTGA TACCAATGGA GGACAATTGA CCAGCCAAAT AGAGAATACA ATAAAAAAAG TAAAGGAAAA GGTTTCTGTG CCTCTGGGTA TTCATTTACA TAATGACGGG GGACTCGGTG TGGCTAATTC ACTGGCTGCC TATGAAAATG GGATCTCCCA GATTCAGGGA ACAATTGGTG GTATTGGGGA ACGATGTGGT AATGCAGACC TATGTAGTAT TATTCCTGCC TTAAAGGTTA AGTATAACGA AGATGTGATA ACTGAAGAAC AGTTATCTAA ATTAAAGTCA GTATACCATT ATGTAATGGA AATAGCTAAC CTCATTCCTC AGAATCAAAC ACCATATGTA GGCAGGAGTG CTTTTACCCA TAAAGGGGGT ATTCATGTCA GTGCCCTTCA GAAAAATCCG GCCACTTATG AACATATTGA GCCAGAAAAG GTTGGAAACA GGAGGCGGGT CCTGGTATCG GAACTTTCAG GGAAGAGTAA TTTAAAATAT AAGTTAAAAG AACTGGGTTT CAATATTGAT AATTTCACAA AAGCCGAATT ATCTAGACTT ACAAAAAAAA TAAAGTTTCT CGAACATAAA GGTTATCAGT TTGAAGGGGC TGATGCCTCC TTTAATCTTC TTGTTAATAG AGAATACGGA AACCATAAAC CCTTTTTTAC TGTTAATGAT TTTAAAATAA TCAGTCATAA CTCCGGTGAA ATGACCAATT CAGAAGCTGT TATTAAGCTT GTTGTGAATA ATGAAAAGGT TCATGTTGCG GCTGAAGGTG ATGGCCCTGT CAATGCCCTT GATAATGCTT TAAGAAAGGG TCTTAGAACA TTTTTCCCTG AGATTAAAAA TATGAAATTA ATAGATTATA AAGTACGGGT GTTAAATGGT GACCGGGGGA CAGCAGCCAA AGTAAGGGTT TTAATTGAAA CATCAAATGG TGAAGATACC TGGACTACAG TTGGTGTTTC AACAAACATT ATTCAGGCCA GCTGGCAGGC TCTGATAGAC AGTATTGAAT ATGGGTTATT AATTCACGAA AAAAAGCTTG AATAA
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Protein sequence | MGLVSLYDTT LRDGAQGEGI SFSLDDKLKI VYRLDELGID YIEGGWPGSN PKDEEFFKKV RNLKLNNARI VAFSSTRRPG IKVENDSNIL KLLEAGVDTV TIFAKSWDFH VTHALEITLD DNLDLIFDTV SFLKDKGLKV FFDAEHFFDG FEANPDYTLK TILTAQDAGA DLIVLCDTNG GQLTSQIENT IKKVKEKVSV PLGIHLHNDG GLGVANSLAA YENGISQIQG TIGGIGERCG NADLCSIIPA LKVKYNEDVI TEEQLSKLKS VYHYVMEIAN LIPQNQTPYV GRSAFTHKGG IHVSALQKNP ATYEHIEPEK VGNRRRVLVS ELSGKSNLKY KLKELGFNID NFTKAELSRL TKKIKFLEHK GYQFEGADAS FNLLVNREYG NHKPFFTVND FKIISHNSGE MTNSEAVIKL VVNNEKVHVA AEGDGPVNAL DNALRKGLRT FFPEIKNMKL IDYKVRVLNG DRGTAAKVRV LIETSNGEDT WTTVGVSTNI IQASWQALID SIEYGLLIHE KKLE
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