Gene Hore_10800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_10800 
Symbol 
ID7312822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp1172751 
End bp1173488 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content30% 
IMG OID643611517 
ProductTPR repeat-containing protein 
Protein accessionYP_002508829 
Protein GI220931921 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTATATCTAA ACTGGGTTTG GTTTTATTGT TGATAATGTT AGTAACAGCT 
ACTGTCGCTG CAGAAAATTT ATTACAGAAA GGAATTAAAG CCTATAATAA TAGGGAGTAC
AATAAAGCCA TTGATTATTT AACCAGTTAC TCAGCTGAAC ATAAGAATAA TCATCTTGGT
TATTTTTATC TGGGATTGAC GTATTTAAAG ATGGATGAAT ATGACCTGGC TGTAGATTCA
TTAAAAGTAG CCAATAAATT GAAGGAAAAT AACTATAATA TTCTTGTAAA TATAGGAAGG
GCATATTATT ATAATAAAAA ATATGATGAT GTTATTACAT ATTTAAATAA GGCAAAAGAA
CTGGAAAATA AAGATGATCA GGTCTATAAT CTACTGGGGT TAATTTATTT AAACCGTACT
GATTATCAGA AAGCTGTTTC TAATTTCAAA AAGGCGGTAG AACTTGATAG TGATAATTAT
TATGCTTTGA ACAATCTTGG CTTTTCTTTT ATCCTTCAGG GTAAATACGA AGAAGCAGAG
ATTTATTTAG AAAAGGCTGT CAAGTTGAAC CCTCCGGTAG CTTTTATTTA TAATAATTAC
GGTATTACTA AAGAAAACCT GAGTAAATTA AAAGAAGCAT TAAAGGCATA TAAAAAGGCC
CTTGAGGTTA ACCCCGATTA TCAGAAAGCT GCCAGAAATG TGGAGAGGGT TAAAAAACTT
ATTGAAAAAG GAGAATAA
 
Protein sequence
MKKFISKLGL VLLLIMLVTA TVAAENLLQK GIKAYNNREY NKAIDYLTSY SAEHKNNHLG 
YFYLGLTYLK MDEYDLAVDS LKVANKLKEN NYNILVNIGR AYYYNKKYDD VITYLNKAKE
LENKDDQVYN LLGLIYLNRT DYQKAVSNFK KAVELDSDNY YALNNLGFSF ILQGKYEEAE
IYLEKAVKLN PPVAFIYNNY GITKENLSKL KEALKAYKKA LEVNPDYQKA ARNVERVKKL
IEKGE