Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_09460 |
Symbol | |
ID | 7313439 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 1019366 |
End bp | 1021057 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 643611385 |
Product | alpha amylase catalytic region |
Protein accession | YP_002508697 |
Protein GI | 220931789 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0188478 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAAA AAGAGAAAAG CTGGTGGAAA GAGGCGGTAG TTTATCAAGT ATACCCGCGT TCTTTTAATG ATACTACTGG TAATGGTATC GGGGACTTAA GGGGTATTAT TGAAAAGCTC GATTATATAA AAGACCTTGG TGTTGATGTT ATCTGGTTAA ATCCCGTTTA CGAGTCTCCA TGTGATGACA TGGGGTATGA TATTAGCAAT TATAGAAAAA TATTACCCCA GTTTGGCACC ATGGAGGATT TTGATCTTCT CCTCTCTGAA ATGCATAAGC GGGGATTAAA ACTTGTCATG GATCTGGTAG TGAATCATAC TTCTGATGAA CATCGCTGGT TTGTTGAGTC CAGGAAGTCC AAAGATAATC CCTACCGGGA TTATTATATC TGGAAAAAGC CAAAAGCTGA TGGTAGCCCT CCCAACAACT GGGTTTCCTA TTTCGGGGGT TCTGCCTGGG AGTATGATGA ACAAACCGGT GAATATTATC TCCATCTGTT TTCCAAAAAA CAGCCTGATT TGAACTGGGA AAACCCAAAG GTCAGAGAAG AAGTAAAGGA TATAATGCGT TTCTGGCTTG ATAAAGGTGT CGATGGATTT AGAATGGATG TTATTGGATT TATTTCAAAG GATCCTGATT TTGAAGATTT TCCAACTGAT AATCCCAGTG GGAAGGATCT TGGTGATAAA TATGCCAATG GGCCCAGATT ACATGAATTT TTACAGGAAC TCCATGATGA TGTTCTTAGT CACTATGACT GTATGACCGT TGGAGAATGC CCCGGAGTAT CACCTGAAGA TGCCCTGTTA ATAGTTGGTA AAGACAGGCG AGAACTCCAG ACTCTCTTTC AATTTGAGGG AATGGACATT GATTATGGTA AAAATGGAAG CCGCTTCAGT ATAGGTAACT GGGATGTTCA TGGTTTTAAA AAAGTATATA CAAAATGGCA TAAAAAGTTA TATGGTAAGG CCTGGAACAG TATTTATCTT ATGAACCATG ACCAACCACG GGCAGTGTCC AGGTTTGGTG ATGATAAAAA ATACCGCAAA GAATCTGCTA AAATGTTAGC AACCTTCCTG CTGTCTATGT GGGGTACCCC CTATATCTAT CAGGGGGAAG AAATAGGTAT GACAAATTGC CCCTTTGAAG GTGTGGAAGA ATTCCGGGAT ATTGAAATGA TTAATTATTA TAATGAACAG ATAAGTAAGG GTAAAACTAA GGAAGAAATA ATGCCCGGAT TATTATACAG AGGACGGGAT AATTCCAGGA CTCCAATTCA ATGGAATGAC TCCAGAAATG CAGTTTTTTC TGATGCTGAA GAGACCTGGA TAAAGGTAAA CCCCAATTAT ACTGAAATTA ATGTTGAAGA AGCTGAAAAA GACCCTGATT CAATTCTCCA TTATTTCCGT CGTATGATTA AAACCAGGAA AGATAATGAT GTTCTAATAT ATGGTGACTA TGAACTGGTA GATGAAGGAA ATGACGATGT GTATGCCTAT CGAAGATTTC TAGACAATGA AGAAATGCTT GTTCTTCTAA ACTTTACAGA TAAAGAGACA AGCTGTGATG TTAGCCCTTA TAACTTAGAA GATAAAGAGC TGATTATCTC TAATTATAAG GGGGGTCAAA AGGTCAAAGG AACTGAAGTG ACTTTAAGGC CTTATGAAGC CAGGATCTAT AAGATAAAAT AA
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Protein sequence | MTKKEKSWWK EAVVYQVYPR SFNDTTGNGI GDLRGIIEKL DYIKDLGVDV IWLNPVYESP CDDMGYDISN YRKILPQFGT MEDFDLLLSE MHKRGLKLVM DLVVNHTSDE HRWFVESRKS KDNPYRDYYI WKKPKADGSP PNNWVSYFGG SAWEYDEQTG EYYLHLFSKK QPDLNWENPK VREEVKDIMR FWLDKGVDGF RMDVIGFISK DPDFEDFPTD NPSGKDLGDK YANGPRLHEF LQELHDDVLS HYDCMTVGEC PGVSPEDALL IVGKDRRELQ TLFQFEGMDI DYGKNGSRFS IGNWDVHGFK KVYTKWHKKL YGKAWNSIYL MNHDQPRAVS RFGDDKKYRK ESAKMLATFL LSMWGTPYIY QGEEIGMTNC PFEGVEEFRD IEMINYYNEQ ISKGKTKEEI MPGLLYRGRD NSRTPIQWND SRNAVFSDAE ETWIKVNPNY TEINVEEAEK DPDSILHYFR RMIKTRKDND VLIYGDYELV DEGNDDVYAY RRFLDNEEML VLLNFTDKET SCDVSPYNLE DKELIISNYK GGQKVKGTEV TLRPYEARIY KIK
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