Gene Hore_08970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08970 
Symbol 
ID7314893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp968335 
End bp969336 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content39% 
IMG OID643611336 
ProductTryptophanyl-tRNA synthetase 
Protein accessionYP_002508648 
Protein GI220931740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AAAAAAAGAA AAGGATATTA ACAGGAGATA GGCCGACCGG GAAATTACAC 
CTGGGTCATT ATGTAGGGAG TCTGCAAAAC AGGGTAAGAT TACAAAAAGA ATATGATACC
TTTTTAATAA TTGCTGATGT TCAGGCCCTG ACAACCAATT TTGAAACACC TGAAAAGCTG
TCCCGGGATG TCAGGCAGGT AGCCACAGAT TATCTTGCTG TTGGGATAGA CCCTGAAGTG
ACAACAATAT TTGTTCAATC TATGGTACCT GAAATTGCAG AGTTGACTGT TTTTTATTCT
ATGATTGTTA CTGTTAACCA ATTACGGCAT AATCCAACTA TTAAGTCTGA AGCTGCCCAG
TATGGCTATA ATGATATGAC ATATGGTTTT CTGGGATATC CGGTTAGTCA GGCAGCTGAC
ATTACTTTCT GTAAAGCCAA TCTGGTCCCC GTAGGTGAAG ATCAGCTTCC TCATATTGAG
CAGACCAGAA GAATTGTAAG AAAATTTAAC AATCTATATG CTCCTGTATT TCCAGAACCC
GAAGCACTTG TCAGTGATAT ACCAAGGTTG GTTGGGCTTG ATGGCAAAAG CAAAATGAGT
AAAAGCCTGG ATAATGCTAT TTATCTTTCT GATAGTGAAG AAGAGGTTAA TAGAAAGGTT
CAAAAGGCGG TAACTGACCC GGCCCGTATC AGGAAAACTG ATCCGGGACA TCCTGAAGTT
TGTACTGTTT TTGAGTATCA TAAGGCTTTT AATTCAGATG AAGTTAATGA AATTGAGGAA
AAATGTCGGG CTGGAAAAAT TGGCTGTGTG GCCTGTAAAA AGCGTCTGGC AGAGGTTTTA
AATAATCTAC TGGAACCAAT GAGGGAGCGC CGTGTTAAAT ATGAACAGAA TCCTGATATT
GTTGACGAAA TATTAATGGC AGGCACTAAA AAAGTCAGGG AAATAGGCAA AAAGACACTT
GAAGAAGTAC GGGAGGCAAT GCATTTAAAT TATTTTAAGT AA
 
Protein sequence
MAEKKKKRIL TGDRPTGKLH LGHYVGSLQN RVRLQKEYDT FLIIADVQAL TTNFETPEKL 
SRDVRQVATD YLAVGIDPEV TTIFVQSMVP EIAELTVFYS MIVTVNQLRH NPTIKSEAAQ
YGYNDMTYGF LGYPVSQAAD ITFCKANLVP VGEDQLPHIE QTRRIVRKFN NLYAPVFPEP
EALVSDIPRL VGLDGKSKMS KSLDNAIYLS DSEEEVNRKV QKAVTDPARI RKTDPGHPEV
CTVFEYHKAF NSDEVNEIEE KCRAGKIGCV ACKKRLAEVL NNLLEPMRER RVKYEQNPDI
VDEILMAGTK KVREIGKKTL EEVREAMHLN YFK