Gene Hore_08900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_08900 
Symbol 
ID7314880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp957704 
End bp958780 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content37% 
IMG OID643611323 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_002508641 
Protein GI220931733 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.0000000788714 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAGGG TACTGGTAGC AATGAGTGGT GGAGTTGATA GTTCAGTAAC AGCAGCATTA 
TTAAAGGAAC AGGGGTATGA AGTCATTGGT GGGACTATGG AAATTTTCCC TGACTATGAA 
CAGCCGCCTC TGGATGAAGG AGGCTGCTGT TCTTTGTCTT CAATAGAGGA TGCCAGAAGG 
GTAGCACATC ATATAGGAAT AAGACATTAT ACATTTAATT TAAAAAAAGT ATTTGAAGAA 
GAGGTTATTA ATAATTTTGT TAATGAATAT AAAAATGCCC GGACCCCAAA TCCATGTGTA 
GTCTGTAATA ATGAAATTAA ATTCAGGTCT TTATTAAAGA AGGCCCTTGA ACTGGATGCT 
GATTACATAG CAACCGGTCA TTATGCTATT GTAGAACACA ATGTAAATGG AAAACACCTT 
TTAAAAAAGG CAAAAGATGT TGATAAGGAC CAGACCTATA TGTTATATGG TTTGACTCAA 
TTCCAGTTAT CCCATACCCT GATGCCACTT GGAAATTATA CCAAACAGGA AGTAAGACAG 
ATGGCCAAAG ACTTTGGTTT TAGAATTCAT AATAAACCAG AAAGTCAGGA AATCTGCTTT 
GTTCCAGATA ATAATTATAC CCGTTTTCTT GATGAAAACT ATCCCGGGCT CGGCAAACCA 
GGTCCTGTTA TGGATACTGA TGGCAATATT CTGGGAAAAC ATAAGGGCCT CCATCATTAT 
ACTATCGGTC AACGTCGTGG ACTTGGTATT TCCCTTGGTT ATCCTGTTTA TGTTGTTAAA 
CTGGACCGGG AAAAGAATGC TGTTATTATT GGTCCTGAGG AAGAGGTATA TAGCAAGAGT 
TTAATAGCTA ATAAGGTAAA CTGGATTTCT ATTGATAAAC TGACTGAACC CATTAAAGTT 
ACGGCACGTA TCAGGTATAA TAGTCCTGAA TCACATGCTA AAATTTATCC AGTAAATGAT 
AATGAAGTTA AGGTGGTTTT TGATAAAAAA CAGAGGGCTG TTACTCCAGG CCAGTCAGTT 
GTTTTTTATG ATGGTAAGGT AGTTGTCGGG GGTGGAATAA TTAAAGAAAA TTTTTAA
 
Protein sequence
MDRVLVAMSG GVDSSVTAAL LKEQGYEVIG GTMEIFPDYE QPPLDEGGCC SLSSIEDARR 
VAHHIGIRHY TFNLKKVFEE EVINNFVNEY KNARTPNPCV VCNNEIKFRS LLKKALELDA 
DYIATGHYAI VEHNVNGKHL LKKAKDVDKD QTYMLYGLTQ FQLSHTLMPL GNYTKQEVRQ 
MAKDFGFRIH NKPESQEICF VPDNNYTRFL DENYPGLGKP GPVMDTDGNI LGKHKGLHHY 
TIGQRRGLGI SLGYPVYVVK LDREKNAVII GPEEEVYSKS LIANKVNWIS IDKLTEPIKV 
TARIRYNSPE SHAKIYPVND NEVKVVFDKK QRAVTPGQSV VFYDGKVVVG GGIIKENF