Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hore_08780 |
Symbol | |
ID | 7314865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halothermothrix orenii H 168 |
Kingdom | Bacteria |
Replicon accession | NC_011899 |
Strand | + |
Start bp | 945123 |
End bp | 946664 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643611308 |
Product | ABC transporter related |
Protein accession | YP_002508629 |
Protein GI | 220931721 |
COG category | [R] General function prediction only |
COG ID | [COG3845] ABC-type uncharacterized transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00000000334619 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAATG GTGACCCGGT CATCCAGATG AACGGTATAA CTAAAAGGTT TCCTGGAGTT GTAGCCAATG ATAAAGTTGA TTTCGAATTA AAAAAAGGCG AAATTCACGC CCTACTGGGG GAAAACGGGG CAGGGAAGAC AACTTTGATG AAATGTCTTT ATGGTTTATA TCAGCCAGAT GAAGGAGATA TATTTATTAA TGGTAAAAAG GTTTCTATTT CTGACCCCAA TGATGCTATT AACCTGGGAA TTGGAATGGT TCATCAACAT TTTATGCTGG TTCCTCCGTT TACTGTTGCT GAAAATATTG TCCTCGGGAG TGAACCGGTT AGAAATTATC AGCTTGACTA CGAAAAAGCA GTTAAAGATG TAAAGCAGTT GTCAAAACGG TATAAACTAA ACGTTGACCC TGAGGCAAAA GTTCAGGATA TAAGTGTCGG TATGCAACAG AGGGTAGAGA TTCTTAAAGC CCTTTATAGA GGGGCGGATA TTTTAATCCT TGATGAACCA ACAGCTGTTC TGACTCCGCA GGAAGTTGAT GAATTAATTG ATATTATGAG GAGCCTAACA GAAGAAGGAA AATCTATAAT ATTTATCACC CATAAATTAA AGGAAGTAAA GGCAATAGCT GACAGGGTAA CGGTTATTCG CAGGGGAAAA TTAATAAATA CTGTTGAAGC TGATTCTGCG ACCTCAGAAG ACCTTGCCAA AATGATGGTT GGCAGGGAAG TACTTTTAAG GGTAGAGAAA GAAAAAGCAA ACCCCGGTGA AGTTATCCTG GAAGTAAGTA ATATAAAAGC CAGAAATGAC AGAGGATTAA TGGCCCTTAA CGGGACAAGT TTTTCTGTAC GCAGGGGAGA AATTCTGGGA ATTGCCGGTG TAGAGGGTAA TGGCCAATCT GAACTGGCCG AAGTATTAAC CGGGTTAAGA GAGATTGAAG ATGGAGAGAT ATATCTTAAA GGTAAAAATA TAGCAAGCTA TTCTACCCGT CAAATTATTG AAGCAGGAGT TTCTTATATT CCTGAAGATA GGCAGAAGAG AGGGCTTGTC TTAGATTTTG CTTTATATGA AAACCTCATC CTCGGAAATC ACTATAGAGC TCCTTATAGT AATGGTCTTA ATATGAATTA TAACAAAATA CGAAAAGAAG TTAGAAATCT AATTAAGGAT TTTGACATAC GGACTCCAGA TGAAGATGTC AAGGCCAAAT CATTATCAGG TGGTAACCAG CAAAAAGTAA TAATTGCCCG GGAATTTAAT AGAGAACATG ATTTATTAAT TGCAGCTCAG CCGACCCGTG GGGTAGATGT TGGAGCTATT GAATTTATTC ATAAACAGAT TATAGAACAA CGTGATTCTG GAAAAGCCGT CCTCCTTATA TCACTGGAGC TTGACGAGAT TCTTTCCTTA AGTGATAGAA TTGCGGTTAT ATATGAGGGA GAAATAGTTG ATATTCTTGA TCCTGATGAA GCTACAGAAG AAAAACTGGG TATGCTTATG GCCGGTGCAA CTACTAACAA TGCCGTGGAA GGGGGAGTGT AA
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Protein sequence | MNNGDPVIQM NGITKRFPGV VANDKVDFEL KKGEIHALLG ENGAGKTTLM KCLYGLYQPD EGDIFINGKK VSISDPNDAI NLGIGMVHQH FMLVPPFTVA ENIVLGSEPV RNYQLDYEKA VKDVKQLSKR YKLNVDPEAK VQDISVGMQQ RVEILKALYR GADILILDEP TAVLTPQEVD ELIDIMRSLT EEGKSIIFIT HKLKEVKAIA DRVTVIRRGK LINTVEADSA TSEDLAKMMV GREVLLRVEK EKANPGEVIL EVSNIKARND RGLMALNGTS FSVRRGEILG IAGVEGNGQS ELAEVLTGLR EIEDGEIYLK GKNIASYSTR QIIEAGVSYI PEDRQKRGLV LDFALYENLI LGNHYRAPYS NGLNMNYNKI RKEVRNLIKD FDIRTPDEDV KAKSLSGGNQ QKVIIAREFN REHDLLIAAQ PTRGVDVGAI EFIHKQIIEQ RDSGKAVLLI SLELDEILSL SDRIAVIYEG EIVDILDPDE ATEEKLGMLM AGATTNNAVE GGV
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