Gene Hore_08050 details

Gene Information

• Locus tag: Hore_08050
• Symbol: aksA
• ID: 7314792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halothermothrix orenii H 168
• Kingdom: Bacteria
• Replicon accession: NC_011899
• Strand: +
• Start bp: 865337
• End bp: 866494
• Gene Length: 1158 bp
• Protein Length: 385 aa
• Translation table: 11
• GC content: 40%
• IMG OID: 643611236
• Product: trans-homoaconitate synthase
• Protein accession: YP_002508557
• Protein GI: 220931649
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0119] Isopropylmalate/homocitrate/citramalate synthases
• TIGRFAM ID: [TIGR02660] homocitrate synthase NifV

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.000000328807
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAAGGA AAATAAAGAT TGTTGATACT ACATTACGTG ATGGTGAGCA GACAGCAGGT 
GTTGTTTTTG CCAATGAAGA GAAAATAAGG ATTGCCAAAC TCCTGGCCGA GATCGGGGTA 
CAGCAGATTG AGGCCGGGAT TCCGGTTATG GGTGGTGATG AGAAAAAGGC AATAAAAAGT 
ATTGTAGAAG CAGATCTCGA TGTCAGTGTC ATGGCCTGGA ACCGGGCAGT TATTTCAGAT 
ATAAAAGAGT CAATTGATTG TGGGGTTGAT GCTGTTGCTA TTTCTATATC TACTTCTGAT 
ATTCATATTA AACATAAACT AAAAAGAGAC CGGGACTGGG TCCTGAAAAA CATGGTGGAG 
GCAACCAGGT TTGCTAAAAA ACATAACTTA TATGTGTCTG TCAATGCTGA AGATTCTTCC 
CGGACAGATA TGGATTTTTT ATTAAGGTTT GCTAAAGAAG CTAAAGAAGC CGGAGCTGAC 
CGTCTCCGTT ATTGTGATAC TGTAGGAACA ATGGAGCCTT TTCAGCTTTA TGAACAGGTC 
AAATTAATAC GAAACGAAAT AGGAATTGAT GTAGAGATGC ATACCCATAA TGATTTTGGC 
CTGGCTACTG CCAATGCTTT AGCTGGAGTT AAAGCCGGTG CCAATTATGT AGGGGTTACC 
GTAGGCGGTC TTGGAGAGCG GGCCGGGAAT GCAGCCCTTG AAGAAGTAGT TATGGCTTTA 
AAATATCTAT ATAATATTGA TCTCAATTTT AAGACAAGTA AATTCAGGGA ACTTAATGAA 
TATGTCGGAA TGGCTTCTAA CCGCCCTGTT CCTGCCTGGA AACCTATTGT AGGCAGTAAC 
ATGTTTGCTC ATGAATCCGG TATTCATACC GATGGGGTTA TTAAAAATGC CAGTACTTAT 
GAAATATTTT CACCAGAAGA AGTGGGGTTA ACAAGACAGA TTGTTATCGG GAAACACTCG 
GGTAGAAATG CCATCATAAA TAAGTTTAAG GAATATGGAA TAAGCTTAAA TAATGATGAG 
GCCACTGAAA TCCTTAAAGA AGTCAGATCC CTTGCCGTCA AATTAAAACG GGCTTTATTT 
GATAAAGAGC TTGTTTATAT CTATCAGGAC CTTAAACAGG AAAGAGGAGA AGAATGGGAA 
GAGGAAAAAC TGTCATAG 

 

Protein sequence

MGRKIKIVDT TLRDGEQTAG VVFANEEKIR IAKLLAEIGV QQIEAGIPVM GGDEKKAIKS 
IVEADLDVSV MAWNRAVISD IKESIDCGVD AVAISISTSD IHIKHKLKRD RDWVLKNMVE 
ATRFAKKHNL YVSVNAEDSS RTDMDFLLRF AKEAKEAGAD RLRYCDTVGT MEPFQLYEQV 
KLIRNEIGID VEMHTHNDFG LATANALAGV KAGANYVGVT VGGLGERAGN AALEEVVMAL 
KYLYNIDLNF KTSKFRELNE YVGMASNRPV PAWKPIVGSN MFAHESGIHT DGVIKNASTY 
EIFSPEEVGL TRQIVIGKHS GRNAIINKFK EYGISLNNDE ATEILKEVRS LAVKLKRALF 
DKELVYIYQD LKQERGEEWE EEKLS