| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hore_07950 |
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| Symbol | |
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| ID | 7314782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothermothrix orenii H 168 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011899 |
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| Strand | + |
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| Start bp | 856198 |
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| End bp | 856989 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 643611226 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_002508547 |
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| Protein GI | 220931639 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR02764] polysaccharide deacetylase family sporulation protein PdaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGTA TTTTAACCCT GGGAAAAAAA AGTATACTTG GTCTGGGGTT GCTTTTTTTT
ATTTCTGTAT TTACGATCGG CTTTTTCGCG GGTGATAAAT ATGGTGATGT TATCCCTGTT
TTGAATAAAA GACTGGTTCC CATATATAAG GTTGACAGGG TTGATAAAAA AATATCCATA
ACTCTGGATG GTACCTGGGG TGCTAATTAT ACAGAAGAAT TACTTGATAT TTTTGAAGAA
AATGATGTGA AGGTTACATT TTTTTTTGCT GGTTACTGGC TGGAGAAATA TCCTGATCTT
GTTAAAAAGA TAGCAGTTGA AGGTCATGAT GTTGAAAACC ATACTTATAC CCATCCCCAT
TGTAATTCTT TATCACCTGA ACAAATAGAA GATGAACTAG AAAGAACCTC AGATTTAATT
GAAGAATTAA TAGGTAAGAG ACCGAGATTT TTCCGTCCCC CATTTGGTGA ATATAATAAT
AAGGTTATTG AAACTGCGAC CGGTCTTGAT TATCAGGTAG TACAATGGAG TCTTGATTCC
CTTGACTGGC AAGAACCGGG TGTGCAGTAT ATTGTTGACC GTATTTTAAA CAATGTTACA
TCTGGTGAAA TTGTATTAAT GCATAATAAT GCTCCCCATA CTCCTGAAGC ATTAAGGATA
TTAATTCCGG AGTTAAAAAA ACGGGGTTTT AAAATAGTCC CCCTGTCTGA ATTAGTATAT
AAAGATAATT ATTATATTCA GTCCCATTCC GGATTACAGG TAAGACAGAA GGGGGCAGGT
GATAGAAATT GA
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| Protein sequence | MNRILTLGKK SILGLGLLFF ISVFTIGFFA GDKYGDVIPV LNKRLVPIYK VDRVDKKISI
TLDGTWGANY TEELLDIFEE NDVKVTFFFA GYWLEKYPDL VKKIAVEGHD VENHTYTHPH
CNSLSPEQIE DELERTSDLI EELIGKRPRF FRPPFGEYNN KVIETATGLD YQVVQWSLDS
LDWQEPGVQY IVDRILNNVT SGEIVLMHNN APHTPEALRI LIPELKKRGF KIVPLSELVY
KDNYYIQSHS GLQVRQKGAG DRN
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