Gene Hore_04880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04880 
Symbol 
ID7314467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand+ 
Start bp529184 
End bp529843 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content42% 
IMG OID643610911 
ProductSporulation protein YtaF 
Protein accessionYP_002508241 
Protein GI220931333 
COG category[S] Function unknown 
COG ID[COG1971] Predicted membrane protein 
TIGRFAM ID[TIGR02840] putative sporulation protein YtaF 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0000000954783 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCT GGACAGTTTG TATCCTGGCT ATTGCTATCA GTGTTGATGG TTTCAGTGTG 
GGATTGACCT ATGGCTTAAG AAAGATTAAA TTTGATCTAA TCCCCCTGTT AATAAACAGT 
GTGATTTCTG CCCTTGCAGT CTACATTACC GGTACTCTGG GAAACAGCCT GGCCGGTTTA 
ATTGAGCAGG AAATGGCCGA AACCCTGGGT GGAATCATGC TTATAATTGT AGGGGGCTGG 
CTTGTTTATT CCAATATAAT AGATTATAAT AGAAATAACT CCTCACCTAA AAAATTGATA 
CATAAAGATA GTGAGGGGGC TCAACTGGTC TGGTCTTTAA ATTTAAAACC CCTGGGGATT 
ATTATTAATA TCCTCAGGGA ACCGGTAAAG GCTGACTTTG ATAATTCAGG CTCCATAAAT 
CAGTTTGAAG CATTGATGCT CGGCCTGGCT CTGGCTTTAG ATGCAGTTGG GGCCGGGTTA 
GGGGCCGGAC TGGCCGGTTT TTTTAAACCA TATATTTCAC TTATTATCGG GGTTATGACC 
CTGTTGTTTT CCGGGGTTGG TTTTTACCTG GGAAGCCTGC TTGATGGTAT GTTACCGGGT 
AAGCTTGAGG TGATGCCCGG CCTTGTTATC ATGTTTCTAG GTTTTTTAAG ATTTTTTTGA
 
Protein sequence
MEFWTVCILA IAISVDGFSV GLTYGLRKIK FDLIPLLINS VISALAVYIT GTLGNSLAGL 
IEQEMAETLG GIMLIIVGGW LVYSNIIDYN RNNSSPKKLI HKDSEGAQLV WSLNLKPLGI 
IINILREPVK ADFDNSGSIN QFEALMLGLA LALDAVGAGL GAGLAGFFKP YISLIIGVMT 
LLFSGVGFYL GSLLDGMLPG KLEVMPGLVI MFLGFLRFF