Gene Hore_04840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04840 
Symbol 
ID7314463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp521261 
End bp522520 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content40% 
IMG OID643610907 
Productpeptidase M23B 
Protein accessionYP_002508237 
Protein GI220931329 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000479397 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAACGAA TATTTGTCAT ACTTTTCATA TTAGTTGTTA TATTGACAGT GCCTACCGTA 
AACTACCTTC AGGGAGAACA TGAATCAGAT AATGGTGAAA GTATTGTTGC TGGTAATAGC
AGTCAGATTG GTCACAGTGA AAACACCCCT GTATCTGATA GTTCAACTTT AAAAGATACC
GGGACAGGTA TTGATAAGGT TAATAATAGC AATCATATAA TAAATAATAA TTCTGATAGT
AATATTGATT CCAGAAATAA TAATAATAAT AAAGTTAATT CCAGTAATAA AGCCAGTTCT
GGTTTGAATG AGAATAATTT TTCTGCTGGA TCTGATGGAA TCAGAGATGA TAATGATGAC
GACAATGACA GTTTTGTTAA TAATGGGAAA GTTAATGAGG GAGTTAATAC TGATGGTAAG
GTAAATAAGT CATCAACTGA TTTAAAAGTT GAGATTACAG GTGTTGGCGG TCCGGACAAC
CTGCAGCCAG GAAAAAATAA CAATGATGAC CGTGTATTGG TTGGAGAGGC CCGGCCCAGG
ATTGAACTGC CCCTTATGGA CAGGATAAAA AAACACAGGG TCAGGAAGGG TGACACCCTG
TGGACAATTG CCCGGAAATA TGATATAGAT ATTGATACCC TTATCGGGGG CAATGATATT
ACCAATATGA ATAGAATAAA ACCTGGAGAC GTTTTGAATA TATTACCTGT TAAAGGGATT
TTATATAAAA TCTCGCCAGG GGAGTCATTA TGGGAGATTT CACGTAAATT TGACGTCAGT
ATGGACAGGA TTGCAGAGGC CAATAATATT CAGAATCCGG ACCTTGTTCA GATAGGGACT
CTACTCATAT TACCTGGAGC TAAACCAGAA TTTAGTTACC AGGACAGGCT TAATAGTAAG
TTAATTAAAC CGGTTCATGC CCGAATTTCT TCCTATTATG GTATGAGGTG GGGAAGGATG
CATGAGGGAA TCGATTATGC TGTTCCCACT GGAACCAGAA TCAGGGCAGC CAGTCACGGA
AAGGTGGTTT ATAGTGGTTG GGCCCGTGGT TATGGTCTGA CTATTATCAT TGAACACCGC
AAGGGTTTTA GAACCCTGTA TGCTCATAAT TCTAAACTCC TGGCCCGGAG TGGAGAATGG
GTAAACAGGG GAGAGGTTAT AGCCCTTTCG GGTAATACCG GACGCTCAAC AGGCCCCCAT
CTTCATTTCG AAGTTCAGGT CAATGGAAGG CCCGTTAATC CACTTAATTA TTTAAAGTAG
 
Protein sequence
MKRIFVILFI LVVILTVPTV NYLQGEHESD NGESIVAGNS SQIGHSENTP VSDSSTLKDT 
GTGIDKVNNS NHIINNNSDS NIDSRNNNNN KVNSSNKASS GLNENNFSAG SDGIRDDNDD
DNDSFVNNGK VNEGVNTDGK VNKSSTDLKV EITGVGGPDN LQPGKNNNDD RVLVGEARPR
IELPLMDRIK KHRVRKGDTL WTIARKYDID IDTLIGGNDI TNMNRIKPGD VLNILPVKGI
LYKISPGESL WEISRKFDVS MDRIAEANNI QNPDLVQIGT LLILPGAKPE FSYQDRLNSK
LIKPVHARIS SYYGMRWGRM HEGIDYAVPT GTRIRAASHG KVVYSGWARG YGLTIIIEHR
KGFRTLYAHN SKLLARSGEW VNRGEVIALS GNTGRSTGPH LHFEVQVNGR PVNPLNYLK