Gene Hore_04800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHore_04800 
Symbol 
ID7314459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalothermothrix orenii H 168 
KingdomBacteria 
Replicon accessionNC_011899 
Strand
Start bp514109 
End bp516085 
Gene Length1977 bp 
Protein Length658 aa 
Translation table11 
GC content42% 
IMG OID643610903 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_002508233 
Protein GI220931325 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAAAAA GTATTAAAGG CAAAATGATG TTACTTATCG GAGTGGTTAT TTTAGTTCTT 
GTTGTAACCA ATTCATGGTT TTCTTTCAAT CAGTCCCGGG ATGTTTTATC AAATTCCCTG
TTTATGATGG CAGAAGATAG TGCCCAGAAA CAGGCTGAGG TAATAACAAA ATGGGTGAAT
AATGTAGTTC AACAGCTTAA ACTTTTGACC AAAACTGAAA GTATCAGGAG TATGGACTGG
GAGAGGCAGG CCCCGATATT AAAAAGGGCT GCTGAACAAA ACGAAGGGGT AGTATCCTTT
TATGTAATTA ATAAACAGGG GATTTACCGT AATGAATTCG GGTCTGGTGA TGTTTCTGAC
CGGGAATATT ATAAAAAGGT CAGGCAAACA AGGGATCTGG TAATCTCTAA ACCGATGATT
GACAGGTCAA CGGGTCTCGA GACGGTAGCA ATTGTCTATC CTATATTTGA TGAAGCAAAT
AACATGATCG GGGTACTCGG GGTTGATCTG GAATTATCGT ACTTACATGA ACTTGTAGAG
GATATGAGAC TTAACGGTTA TGGCTATGGG TGGATTATCA GTGATGATAT GACTACCATT
GCCCATCCAG AGGAAAAGTT TTTGGGCAAT CAGGATATTT TTAATGGTGA TAAAGATTTA
AAGATGATTG CTACCAAAAT GGCAGCAGGT AAGAAAGGGT CAGATACATA TACATTAAAT
GGTGTTGAAA AAGGACTTGC TTATGCCCCC ATTGAAATAA CCAACTGGTC AGTAGCTCTC
TGTGTAAACC TTGATGATAT TCTGGCTCCG GTAAATGTGG TCAGGAGAAC AAGTATCTGG
ATAGGTATTA TTGCTATTAT TATAGGATTA GCTCTTAGTT ATTTTATGGC CGGTTATTTT
GCTAATCCAG TTACTGAAGT TACTTCATTT GCCAGGACGA TTGCTGAAGG TGATTTAACA
GTTAGAAAAT CAGGTTCCTA TATAAATCGA GATGATGAGA TTGGAACCCT GGCCCAGGCT
TTTAACCAGA TGCTGGCATA TTTCCGGGAA ATGATTGGTA CAGTTCAGGA ATCATCCCAG
CAGGTTGCTG CATCCAGTGA GGAGCTTTCA GCGGCCAGTG ATCAGGTCGG TGAGAGTGCT
GAACAGGTTG GTAAAGCCAT TCAGGATGTA GCCTCCGGCG CTGAAGAGCA GGCAGCCCAG
CTCAATGAAA CCAGTAGTAA TGTTGAGGAG ATGATTCAGC AGATAAGATA TGTCAGTAAA
GATGCTGACC GGATGGAAAG TGCTGCTAAA GATGTTATGA AGAATATCGA GGAGGGATCA
GAGTCAGTAG AGAGGTCTAT TGGTGAGGTT AACAATGTGA GAACTGATAC AACTGAAGTT
GCTGGAATTA TTCAGTCCCT GGGGAAAACT TCTGAAGAGA TTGAAGATAT TATAGAAATT
ATAAGTAATA TTGCTAATCA GACCAATCTC CTTGCCCTGA ATGCAGCCAT TGAGGCGGCC
CGGGCCGGAG AAGCTGGAAG AGGTTTTAGT GTTGTAGCTG ATGAGATCAG GGATCTGGCT
GAAGAAACTA CTACCTCAAC AGAACGGATT TCTGATTTAA TAAGGAGGAT TCAGCAGAAT
GTCTCTGCAG CTGTAGACAG GATGGATAAA AATATCGACA CTGTAGAGGG TAGTGTTGCT
GCCATCGAGG AAAATGGTCA GGTCTTTAAC GAGATTAAAG AGGTCACTAA AAACCTCATC
GAGCTTATAA ATCAGGTCAG TTATAATACC AGAGAACTGG CCAAAAACAG TGATGAAGTC
TCCAGTGCTA TTCAGGAGGT AGCGGCTGTA AGCCAGGAAG CTGCTGGAAA TGCTGAGGAG
GTTGCTGCTT CAAGTGAAGA ACAGCTGGCG GCCACTGATG AAATAGTATC AGGAGCCAGA
GAACTGGCCA GGGTTGCTGA TGAGCTTGCC CGGGCGGTTG ATATATTTAA GATTTAA
 
Protein sequence
MLKSIKGKMM LLIGVVILVL VVTNSWFSFN QSRDVLSNSL FMMAEDSAQK QAEVITKWVN 
NVVQQLKLLT KTESIRSMDW ERQAPILKRA AEQNEGVVSF YVINKQGIYR NEFGSGDVSD
REYYKKVRQT RDLVISKPMI DRSTGLETVA IVYPIFDEAN NMIGVLGVDL ELSYLHELVE
DMRLNGYGYG WIISDDMTTI AHPEEKFLGN QDIFNGDKDL KMIATKMAAG KKGSDTYTLN
GVEKGLAYAP IEITNWSVAL CVNLDDILAP VNVVRRTSIW IGIIAIIIGL ALSYFMAGYF
ANPVTEVTSF ARTIAEGDLT VRKSGSYINR DDEIGTLAQA FNQMLAYFRE MIGTVQESSQ
QVAASSEELS AASDQVGESA EQVGKAIQDV ASGAEEQAAQ LNETSSNVEE MIQQIRYVSK
DADRMESAAK DVMKNIEEGS ESVERSIGEV NNVRTDTTEV AGIIQSLGKT SEEIEDIIEI
ISNIANQTNL LALNAAIEAA RAGEAGRGFS VVADEIRDLA EETTTSTERI SDLIRRIQQN
VSAAVDRMDK NIDTVEGSVA AIEENGQVFN EIKEVTKNLI ELINQVSYNT RELAKNSDEV
SSAIQEVAAV SQEAAGNAEE VAASSEEQLA ATDEIVSGAR ELARVADELA RAVDIFKI